RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TTLL6Q8N841 843 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 PRRC2BQ5JSZ5 2229 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SERPINB8P50452 374 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 KRT78Q8N1N4 520 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MYCBPAPQ8TBZ2 947 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 EPS8L3Q8TE67 593 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 FHOD1Q9Y613 1164 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 E7ENQ6 273 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 PRDX5P30044 214 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MTFR1Q15390 333 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SPRTNQ9H040 489 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 KLHL31Q9H511 634 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 CNGB3Q9NQW8 809 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 NDUFA13Q9P0J0 144 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 A0A1W2PQJ5 194 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CLPTM1O96005 669 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 BNC2Q6ZN30 1099 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 C19orf18Q8NEA5 215 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 JADE3Q92613 823 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 WHRNQ9P202 907 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ZMYND8Q9ULU4 1186 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 RRM2P31350 389 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ACOT2P49753 483 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 SUSD4Q5VX71 490 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CENPLQ8N0S6 344 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 KCNB2Q92953 911 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF669Q96BR6 464 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 YIPF2Q9BWQ6 316 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 SNX13Q9Y5W8 968 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 TK2O00142 265 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 SLC7A14Q8TBB6 771 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 DPF2Q92785 391 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ARHGEF7Q14155 803 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 SHROOM1Q2M3G4 852 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 PIN4Q9Y237 131 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ASMTLO95671 621 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 BFSP2Q13515 415 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 UNC45BQ8IWX7 931 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 DGAT1O75907 488 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CYBBP04839 570 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 C11orf96Q7Z7L8 435 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 LRRC6Q86X45 466 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ANKRD49Q8WVL7 239 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 HNRNPLLQ8WVV9 542 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 GPR63Q9BZJ6 419 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 FCGR1AP12314 374 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 PTPN7P35236 360 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 TALDO1P37837 337 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CHRNB3Q05901 458 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 FAM49BQ9NUQ9 324 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 NMRK1Q9NWW6 199 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 HAO1Q9UJM8 370 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 NPM3O75607 178 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 CALB2P22676 271 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 COILP38432 576 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 PNKPQ96T60 521 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
CSMD1-217ENST00000602723 HEY2Q9UBP5 337 aa9.97□□□□□ -0.81
CSMD1-217ENST00000602723 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 KCNJ1P48048 391 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 DPP10Q8N608 796 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 ASCC3Q8N3C0 2202 aaKnown RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 H7C1W4 665 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 CHI3L1P36222 383 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 C4orf22Q6V702 233 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 TPCN2Q8NHX9 752 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 NMD3Q96D46 503 aaKnown RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 MASTLQ96GX5 879 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF512Q96ME7 567 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 ALDH1A1P00352 501 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 PDGFRBP09619 1106 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 LTKP29376 864 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 MAPK7Q13164 816 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 PKN2Q16513 984 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms