RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GABRDO14764 452 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 TADA3O75528 432 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 ARSAP15289 507 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 LHX1P48742 406 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 STK38Q15208 465 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 SOWAHAQ2M3V2 549 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 CC2D1AQ6P1N0 951 aaPredicted RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 SPATA2LQ8IUW3 424 aaPredicted RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 TOP6BLQ8N6T0 577 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 GLIS3Q8NEA6 775 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 RIN3Q8TB24 985 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 SPATA18Q8TC71 538 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 HPS3Q969F9 1004 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 ANKRD36BP1Q96IX9 119 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 INTS13Q9NVM9 706 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 R3HCC1Q9Y3T6 440 aaKnown RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 PTPRJQ12913 1337 aa14.12□□□□□ -0.15
RPS28-204ENST00000602140 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 KIAA0391O15091 583 aaKnown RBP14.11□□□□□ -0.15
RPS28-204ENST00000602140 STX6O43752 255 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 NOL4O94818 638 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 PCSK1P29120 753 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 HOXA6P31267 233 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
RPS28-204ENST00000602140 GRSF1Q12849 480 aaKnown RBP eCLIP14.11□□□□□ -0.15
RPS28-204ENST00000602140 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 CFAP221Q4G0U5 840 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 TMEM196Q5HYL7 178 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 FSTL4Q6MZW2 842 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 PKN3Q6P5Z2 889 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 STXBP4Q6ZWJ1 553 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 CEP68Q76N32 757 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 CBWD2Q8IUF1 395 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 SCN4BQ8IWT1 228 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 TTC16Q8NEE8 873 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 OR5B17Q8NGF7 314 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 TRMT2BQ96GJ1 504 aaKnown RBP14.11□□□□□ -0.15
RPS28-204ENST00000602140 HPDLQ96IR7 371 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 MYRFLQ96LU7 910 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 TNMDQ9H2S6 317 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 TRPC7Q9HCX4 862 aa14.11□□□□□ -0.15
RPS28-204ENST00000602140 DENND4CQ5VZ89 1909 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 DCDC2BA2VCK2 349 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 TRDMT1O14717 391 aaKnown RBP14.1□□□□□ -0.15
RPS28-204ENST00000602140 LRP3O75074 770 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 ATP2C2O75185 946 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 TNNC2P02585 160 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 LMO2P25791 158 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 HOXD13P35453 343 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 PXNP49023 591 aaPredicted RBP14.1□□□□□ -0.15
RPS28-204ENST00000602140 FAM160A1Q05DH4 1040 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 ZNF268Q14587 947 aaPredicted RBP14.1□□□□□ -0.15
RPS28-204ENST00000602140 MTF1Q14872 753 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 PDGFRLQ15198 375 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 SURF1Q15526 300 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 FAM171BQ6P995 826 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 DPH6Q7L8W6 267 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 WDR5BQ86VZ2 330 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 LINC00301Q8NCQ3 95 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 FUBP3Q96I24 572 aaKnown RBP eCLIP14.1□□□□□ -0.15
RPS28-204ENST00000602140 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 CYP2S1Q96SQ9 504 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 TRIM9Q9C026 710 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 LRRC27Q9C0I9 530 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 SEMA4GQ9NTN9 838 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 KBTBD4Q9NVX7 518 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 HSPBP1Q9NZL4 362 aa14.1□□□□□ -0.15
RPS28-204ENST00000602140 TRAV19A0A0A6YYK7 116 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 K7ELQ4 463 aaPredicted RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 SPTLC2O15270 562 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 ATG13O75143 517 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 EGFP01133 1207 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 CKMP06732 381 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 USP17L7P0C7H9 530 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 MAGEA11P43364 429 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 GALK1P51570 392 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 PSMC1P62191 440 aaKnown RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 AMPD2Q01433 879 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 E2F4Q16254 413 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 C4orf50Q6ZRC1 276 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 LIMS2Q7Z4I7 341 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 FSIP1Q8NA03 581 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 KBTBD7Q8WVZ9 684 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 DHX58Q96C10 678 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 TFIP11Q9UBB9 837 aaKnown RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
RPS28-204ENST00000602140 CDH9Q9ULB4 789 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 OBSL1O75147 1896 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
RPS28-204ENST00000602140 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.08□□□□□ -0.16
RPS28-204ENST00000602140 C2orf78A6NCI8 922 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms