RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 TRIM9Q9C026 710 aa24.95■■□□□ 1.58
GTPBP3-227ENST00000602056 TNMDQ9H2S6 317 aa24.95■■□□□ 1.58
GTPBP3-227ENST00000602056 TFIP11Q9UBB9 837 aaKnown RBP24.95■■□□□ 1.58
GTPBP3-227ENST00000602056 USP18Q9UMW8 372 aa24.95■■□□□ 1.58
GTPBP3-227ENST00000602056 K7ELQ4 463 aaPredicted RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 SPTLC2O15270 562 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 ATP2C2O75185 946 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 TMEM191BP0C7N4 346 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 LMO2P25791 158 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 ATXN1P54253 815 aaKnown RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 RPL10AP62906 217 aaKnown RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 RUNX3Q13761 415 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 CFAP221Q4G0U5 840 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 FSTL4Q6MZW2 842 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 FAM171BQ6P995 826 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 PRR23BQ6ZRT6 265 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 LONP2Q86WA8 852 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 SYNPOQ8N3V7 929 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 MRPS31Q92665 395 aaKnown RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 TRMT2BQ96GJ1 504 aaKnown RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 SLC22A12Q96S37 553 aa24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 NUP210Q8TEM1 1887 aaPredicted RBP24.94■■□□□ 1.58
GTPBP3-227ENST00000602056 SOBPA7XYQ1 873 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 HOXA6P31267 233 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 LHX1P48742 406 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 LMNB2Q03252 620 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 SPEM2Q0P670 501 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 SIM2Q14190 667 aaPredicted RBP24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 TMEM196Q5HYL7 178 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 NAIF1Q69YI7 327 aaPredicted RBP24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 EPM2AIP1Q7L775 607 aaPredicted RBP24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 HPDLQ96IR7 371 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 BACH2Q9BYV9 841 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 FBRSL1Q9HCM7 1045 aaKnown RBP24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 HSPBP1Q9NZL4 362 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 RAB23Q9ULC3 237 aa24.93■■□□□ 1.58
GTPBP3-227ENST00000602056 ZNF233A6NK53 670 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 KIAA0391O15091 583 aaKnown RBP24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 TGFB1I1O43294 461 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 ZNF268Q14587 947 aaPredicted RBP24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 SHC4Q6S5L8 630 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 ANKRD36BP1Q96IX9 119 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 CYP2S1Q96SQ9 504 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 KIF9Q9HAQ2 790 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 CRTAC1Q9NQ79 661 aa24.92■■□□□ 1.58
GTPBP3-227ENST00000602056 PRR5-ARHGAP8B1AHC4 643 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 TRDMT1O14717 391 aaKnown RBP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 PPP6R2O75170 966 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 RETP07949 1114 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 PCSK1P29120 753 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 PSMC1P62191 440 aaKnown RBP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 ARHGAP8P85298 464 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 DUOXA2Q1HG44 320 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 CNNM4Q6P4Q7 775 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 DPH6Q7L8W6 267 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 SPATA2LQ8IUW3 424 aaPredicted RBP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 SCN4BQ8IWT1 228 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 ZNF507Q8TCN5 953 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 DHX58Q96C10 678 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 FUBP3Q96I24 572 aaKnown RBP eCLIP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 POLR3BQ9NW08 1133 aaPredicted RBP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 UXTQ9UBK9 157 aaPredicted RBP24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 NME7Q9Y5B8 376 aa24.91■■□□□ 1.58
GTPBP3-227ENST00000602056 CNR2P34972 360 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 MYO1EQ12965 1108 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 ZNF77Q15935 545 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 WDR5BQ86VZ2 330 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 SYT15Q9BQS2 421 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 CUEDC2Q9H467 287 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 TRPC7Q9HCX4 862 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 AGPAT3Q9NRZ7 376 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 GCNT4Q9P109 453 aa24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.9■■□□□ 1.58
GTPBP3-227ENST00000602056 EIF3DO15371 548 aaKnown RBP eCLIP24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 EGFP01133 1207 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 TNNC2P02585 160 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 MAGEA11P43364 429 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 ASIC1P78348 528 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 FAM160A1Q05DH4 1040 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 EHHADHQ08426 723 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 STXBP4Q6ZWJ1 553 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 WDR49Q8IV35 697 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 MYLPFQ96A32 169 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 C7orf25Q9BPX7 421 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 LRRC27Q9C0I9 530 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 GZF1Q9H116 711 aaPredicted RBP24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 CDH9Q9ULB4 789 aa24.89■■□□□ 1.58
GTPBP3-227ENST00000602056 KIF26AQ9ULI4 1882 aaPredicted RBP24.89■■□□□ 1.57
GTPBP3-227ENST00000602056 SPTBN2O15020 2390 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 C2orf78A6NCI8 922 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 CUTAO60888 179 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 YEATS4O95619 227 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 CST3P01034 146 aaPredicted RBP24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 PDGFRBP09619 1106 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 WARSP23381 471 aaKnown RBP24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 CASP1P29466 404 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 PXNP49023 591 aaPredicted RBP24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 GALK1P51570 392 aa24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 GRSF1Q12849 480 aaKnown RBP eCLIP24.88■■□□□ 1.57
GTPBP3-227ENST00000602056 USP4Q13107 963 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms