RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RTP3Q9BQQ7 232 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CRTAC1Q9NQ79 661 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CTTNBP2NLQ9P2B4 639 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 STRIP2Q9ULQ0 834 aa23.91■■□□□ 1.42
IRF3-228ENST00000601291 CAPN15O75808 1086 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 OAZ2O95190 189 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 CYP1A2P05177 515 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 SLC8A3P57103 927 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 BST2Q10589 180 aaKnown RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 MAPRE1Q15691 268 aaKnown RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 KIAA0319Q5VV43 1072 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 SYT10Q6XYQ8 523 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 CEP57Q86XR8 500 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 ANKRD52Q8NB46 1076 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 MYCBPAPQ8TBZ2 947 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 PHOSPHO2Q8TCD6 241 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 IPO4Q8TEX9 1081 aaKnown RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 MED10Q9BTT4 135 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 GPR62Q9BZJ7 368 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 SYNCQ9H7C4 482 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 AVENQ9NQS1 362 aaPredicted RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 CXXC1Q9P0U4 656 aaPredicted RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 SALL4Q9UJQ4 1053 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 NR2E3Q9Y5X4 410 aa23.9■■□□□ 1.42
IRF3-228ENST00000601291 MRPL42Q9Y6G3 142 aaKnown RBP23.9■■□□□ 1.42
IRF3-228ENST00000601291 FGFR3P22607 806 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 HTRA4P83105 476 aaPredicted RBP23.89■■□□□ 1.41
IRF3-228ENST00000601291 PDCLQ13371 301 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 TCEAL1Q15170 157 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 PKDCCQ504Y2 493 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 VARS2Q5ST30 1063 aaKnown RBP23.89■■□□□ 1.41
IRF3-228ENST00000601291 TTC30AQ86WT1 665 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 TMEM173Q86WV6 379 aaPredicted RBP23.89■■□□□ 1.41
IRF3-228ENST00000601291 SLC35G2Q8TBE7 412 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 IGSF21Q96ID5 467 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 MIS12Q9H081 205 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 UVRAGQ9P2Y5 699 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 DNAI1Q9UI46 699 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 INSL6Q9Y581 213 aa23.89■■□□□ 1.41
IRF3-228ENST00000601291 MKI67P46013 3256 aaKnown RBP23.89■■□□□ 1.41
IRF3-228ENST00000601291 ATMINO43313 823 aaPredicted RBP23.88■■□□□ 1.41
IRF3-228ENST00000601291 SNX16P57768 344 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 PLCB3Q01970 1234 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 ZNF280DQ6N043 979 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 FUKQ8N0W3 1084 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 SLC35F6Q8N357 371 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 ZNF592Q92610 1267 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 AAASQ9NRG9 546 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 CYTH4Q9UIA0 394 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 CAPN6Q9Y6Q1 641 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 SCINQ9Y6U3 715 aa23.88■■□□□ 1.41
IRF3-228ENST00000601291 MYBPHLA2RUH7 354 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 RRM1P23921 792 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 PTP4A2Q12974 167 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 PTPN20Q4JDL3 420 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 HERC6Q8IVU3 1022 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 FIBCD1Q8N539 461 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 COLGALT1Q8NBJ5 622 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 OR10T2Q8NGX3 314 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 BCL7CQ8WUZ0 217 aaPredicted RBP23.87■■□□□ 1.41
IRF3-228ENST00000601291 TMEM169Q96HH4 297 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 PCED1BQ96HM7 432 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 NUP85Q9BW27 656 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 MRPL47Q9HD33 250 aaKnown RBP23.87■■□□□ 1.41
IRF3-228ENST00000601291 ST7Q9NRC1 585 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 PTPRSQ13332 1948 aa23.87■■□□□ 1.41
IRF3-228ENST00000601291 H7C4K7 107 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 ATP2A2P16615 1042 aaKnown RBP23.86■■□□□ 1.41
IRF3-228ENST00000601291 CASQ1P31415 396 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 PPM1AP35813 382 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 HADHBP55084 474 aaKnown RBP23.86■■□□□ 1.41
IRF3-228ENST00000601291 PDE4CQ08493 712 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 CTXN3Q4LDR2 81 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 C2CD6Q53TS8 623 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 FAM171BQ6P995 826 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 DCP1BQ8IZD4 617 aaKnown RBP23.86■■□□□ 1.41
IRF3-228ENST00000601291 SLC39A11Q8N1S5 342 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 KIF18AQ8NI77 898 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 STK32AQ8WU08 396 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 MYLPFQ96A32 169 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 WDR24Q96S15 920 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 CPXM1Q96SM3 734 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 TTPALQ9BTX7 342 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 OXCT2Q9BYC2 517 aaPredicted RBP23.86■■□□□ 1.41
IRF3-228ENST00000601291 B3GNT5Q9BYG0 378 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 OSGEPQ9NPF4 335 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 PCDHGC5Q9Y5F6 944 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 OR6C75A6NL08 312 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 FAM200BP0CF97 657 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 CCDC142Q17RM4 750 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 ANKS3Q6ZW76 656 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 FAM35AQ86V20 835 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 ZNF564Q8TBZ8 553 aaPredicted RBP23.86■■□□□ 1.41
IRF3-228ENST00000601291 SLC35F5Q8WV83 523 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 C18orf8Q96DM3 657 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 DUSP16Q9BY84 665 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 KRT82Q9NSB4 513 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 PARVAQ9NVD7 372 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 SPG21Q9NZD8 308 aa23.86■■□□□ 1.41
IRF3-228ENST00000601291 WDR35Q9P2L0 1181 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms