RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	MAGEA11	P43364	429 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	IRF2BP1	Q8IU81	584 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	CRYBG2	Q8N1P7	616 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	AOPEP	Q8N6M6	819 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	TATDN2	Q93075	761 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	PSMG2	Q969U7	264 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	ELMO3	Q96BJ8	720 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	HEXIM2	Q96MH2	286 aa	Known RBP	13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	INTS2	Q9H0H0	1204 aa	Known RBP	13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	CRTAC1	Q9NQ79	661 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	CISH	Q9NSE2	258 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	TMLHE	Q9NVH6	421 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	FANCL	Q9NW38	375 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	UXT	Q9UBK9	157 aa	Predicted RBP	13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	COL6A3	P12111	3177 aa		13.84	□□□□□ -0.19
SRRM1-223	ENST00000600523	HCRT	O43612	131 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	CILP	O75339	1184 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	MYL4	P12829	197 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	SP100	P23497	879 aa	Predicted RBP	13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	BDNF	P23560	247 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	MFAP3	P55082	362 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	GCNT1	Q02742	428 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	NFKBIB	Q15653	356 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	ZSCAN23	Q3MJ62	389 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	ARHGAP15	Q53QZ3	475 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	JAKMIP2	Q96AA8	810 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	SMARCD1	Q96GM5	515 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	TMEM176A	Q96HP8	235 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	PKMYT1	Q99640	499 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	GPR88	Q9GZN0	384 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	SDCBP2	Q9H190	292 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	DPEP3	Q9H4B8	488 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	AVEN	Q9NQS1	362 aa	Predicted RBP	13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	CEP72	Q9P209	647 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	DNMT3B	Q9UBC3	853 aa	Known RBP	13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	ZMYM5	Q9UJ78	669 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	CDH22	Q9UJ99	828 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	KIAA1257	Q9ULG3	409 aa		13.83	□□□□□ -0.2
SRRM1-223	ENST00000600523	GOLGA6L19	H0YKK7	550 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	SOAT2	O75908	522 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	MICAL2	O94851	1124 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	VNN2	O95498	520 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	FAM200B	P0CF97	657 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CDC25C	P30307	473 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CDR1	P51861	262 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	FILIP1L	Q4L180	1135 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	ZNF394	Q53GI3	561 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CDKAL1	Q5VV42	579 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	ZDHHC14	Q8IZN3	488 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	TTC9B	Q8N6N2	239 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	GIPC2	Q8TF65	315 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CYFIP2	Q96F07	1278 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CRACR2A	Q9BSW2	395 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CRISPLD1	Q9H336	500 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLITRK6	Q9H5Y7	841 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	HCFC1R1	Q9NWW0	138 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	GDE1	Q9NZC3	331 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	APEX2	Q9UBZ4	518 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	CDH7	Q9ULB5	785 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	PCDHB4	Q9Y5E5	795 aa		13.82	□□□□□ -0.2
SRRM1-223	ENST00000600523	LOC730098	B7Z3J9	87 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	CD19	P15391	556 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	ATF6	P18850	670 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	RFX1	P22670	979 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	NTHL1	P78549	312 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	KRT31	Q15323	416 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	DDR2	Q16832	855 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	SMYD5	Q6GMV2	418 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	TRIM65	Q6PJ69	517 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	TMEM270	Q6UE05	265 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	DENND5B	Q6ZUT9	1274 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	MTSS1L	Q765P7	747 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	RRAGA	Q7L523	313 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	FAM35A	Q86V20	835 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	SLC2A14	Q8TDB8	520 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	NXPE3	Q969Y0	559 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	SPATA17	Q96L03	361 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	C8orf48	Q96LL4	319 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	ARID3A	Q99856	593 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	LPIN3	Q9BQK8	851 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	B3GNT5	Q9BYG0	378 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	KRT82	Q9NSB4	513 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	FAM49B	Q9NUQ9	324 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	TAB2	Q9NYJ8	693 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	HESX1	Q9UBX0	185 aa		13.81	□□□□□ -0.2
SRRM1-223	ENST00000600523	EYS	Q5T1H1	3165 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	C19orf67	A6NJJ6	358 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	C2CD4D	B7Z1M9	353 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	LRRN2	O75325	713 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	AP1G2	O75843	785 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	RTN3	O95197	1032 aa	Predicted RBP	13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	PAEP	P09466	180 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	KRT5	P13647	590 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	CCDC130	P13994	396 aa		13.8	□□□□□ -0.2
SRRM1-223	ENST00000600523	GABRR2	P28476	465 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms