RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 GJA4P35212 333 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 CFAP221Q4G0U5 840 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 PLA2G2CQ5R387 149 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
SMG9-210ENST00000600097 SDHAF4Q5VUM1 108 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 CCDC26Q8TAB7 109 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 RIN3Q8TB24 985 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 ATP2A3Q93084 1043 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 FUBP3Q96I24 572 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMG9-210ENST00000600097 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 ECT2Q9H8V3 914 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 FBRSL1Q9HCM7 1045 aaKnown RBP18.46■□□□□ 0.55
SMG9-210ENST00000600097 GDAP2Q9NXN4 497 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 RBAKQ9NYW8 714 aaPredicted RBP18.46■□□□□ 0.55
SMG9-210ENST00000600097 ITGA11Q9UKX5 1188 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 PCDHB13Q9Y5F0 798 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 SDK1Q7Z5N4 2213 aa18.46■□□□□ 0.55
SMG9-210ENST00000600097 CNOT1A5YKK6 2376 aaKnown RBP18.45■□□□□ 0.54
SMG9-210ENST00000600097 TRAV19A0A0A6YYK7 116 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
SMG9-210ENST00000600097 TM4SF5O14894 197 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 TADA3O75528 432 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 CKMP06732 381 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 GARTP22102 1010 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 CYP2F1P24903 491 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 PCSK1P29120 753 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 LHX1P48742 406 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 KCNA1Q09470 495 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 ALCAMQ13740 583 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 CCDC6Q16204 474 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 SV2BQ7L1I2 683 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 SYT13Q7L8C5 426 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 CSGALNACT2Q8N6G5 542 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 TOP6BLQ8N6T0 577 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 FSIP1Q8NA03 581 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 STKLD1Q8NE28 680 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 OSCP1Q8WVF1 389 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 ACDQ96AP0 544 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 TRPC7Q9HCX4 862 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 VPS45Q9NRW7 570 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 DUS2Q9NX74 493 aaKnown RBP18.45■□□□□ 0.54
SMG9-210ENST00000600097 GTF3C4Q9UKN8 822 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 ANGPTL2Q9UKU9 493 aa18.45■□□□□ 0.54
SMG9-210ENST00000600097 CHD8Q9HCK8 2581 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 GCNT3O95395 438 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 ACAT1P24752 427 aaKnown RBP18.44■□□□□ 0.54
SMG9-210ENST00000600097 TXLNAP40222 546 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 MPLP40238 635 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 IFNAR2P48551 515 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 WNT7BP56706 349 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 RBP5P82980 135 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 NR1H3Q13133 447 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 ELF2Q15723 593 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 ZNF77Q15935 545 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 PLK5Q496M5 336 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 STPG1Q5TH74 334 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 RRAGBQ5VZM2 374 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 USP49Q70CQ1 688 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 SPATA2LQ8IUW3 424 aaPredicted RBP18.44■□□□□ 0.54
SMG9-210ENST00000600097 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 CD101Q93033 1021 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 DNAJC19Q96DA6 116 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 SAAL1Q96ER3 474 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 HHIPQ96QV1 700 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
SMG9-210ENST00000600097 TBC1D7Q9P0N9 293 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 EBF1Q9UH73 591 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 R3HCC1Q9Y3T6 440 aaKnown RBP18.44■□□□□ 0.54
SMG9-210ENST00000600097 SNX9Q9Y5X1 595 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 TCHHQ07283 1943 aa18.44■□□□□ 0.54
SMG9-210ENST00000600097 GREB1Q4ZG55 1949 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 MYMKA6NI61 221 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 GABRDO14764 452 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 RHOBTB1O94844 696 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 APBB3O95704 486 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 KRT19P08727 400 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 MAGEA11P43364 429 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 USP4Q13107 963 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 DPH6Q7L8W6 267 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 ADGRF2Q8IZF7 708 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 RPLP0P6Q8NHW5 317 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 CYP2S1Q96SQ9 504 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 RXFP3Q9NSD7 469 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 SRPRBQ9Y5M8 271 aaKnown RBP18.43■□□□□ 0.54
SMG9-210ENST00000600097 SPAG17Q6Q759 2223 aa18.43■□□□□ 0.54
SMG9-210ENST00000600097 MAP1BP46821 2468 aaKnown RBP18.42■□□□□ 0.54
SMG9-210ENST00000600097 TMEM191BP0C7N4 346 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 TCF3P15923 654 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 PMLP29590 882 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 PDE6CP51160 858 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 MYO1EQ12965 1108 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 DMC1Q14565 340 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 KCNB1Q14721 858 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 EML3Q32P44 896 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 N4BP2L1Q5TBK1 243 aaPredicted RBP18.42■□□□□ 0.54
SMG9-210ENST00000600097 C4orf50Q6ZRC1 276 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 SCN4BQ8IWT1 228 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms