RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
LIG1-219ENST00000600055 TWNKQ96RR1 684 aa16.22■□□□□ 0.19
LIG1-219ENST00000600055 ARID3AQ99856 593 aa16.22■□□□□ 0.19
LIG1-219ENST00000600055 B3GNT5Q9BYG0 378 aa16.22■□□□□ 0.19
LIG1-219ENST00000600055 SMOC2Q9H3U7 446 aa16.22■□□□□ 0.19
LIG1-219ENST00000600055 ASB3Q9Y575 518 aa16.22■□□□□ 0.19
LIG1-219ENST00000600055 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 ZNF197O14709 1029 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 ERCC5P28715 1186 aaPredicted RBP16.21■□□□□ 0.19
LIG1-219ENST00000600055 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 KCNH2Q12809 1159 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 LRMPQ12912 555 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 VEPH1Q14D04 833 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 TEAD2Q15562 447 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
LIG1-219ENST00000600055 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 TPD52L1Q16890 204 aaPredicted RBP16.21■□□□□ 0.19
LIG1-219ENST00000600055 ITIH5Q86UX2 942 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 SHKBP1Q8TBC3 707 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 ZNF518BQ9C0D4 1074 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 KCNK12Q9HB15 430 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 CYP3A43Q9HB55 503 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 DACH1Q9UI36 760 aa16.21■□□□□ 0.19
LIG1-219ENST00000600055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
LIG1-219ENST00000600055 TTC28Q96AY4 2481 aa16.21■□□□□ 0.18
LIG1-219ENST00000600055 A0A1W2PRU2 124 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 AFPP02771 609 aaKnown RBP16.2■□□□□ 0.18
LIG1-219ENST00000600055 HMGA1P17096 107 aaKnown RBP16.2■□□□□ 0.18
LIG1-219ENST00000600055 GRIK1P39086 918 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 MAGEA11P43364 429 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 RPL10AP62906 217 aaKnown RBP16.2■□□□□ 0.18
LIG1-219ENST00000600055 INCA1Q0VD86 236 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 PARM1Q6UWI2 310 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 GAREM2Q75VX8 874 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 UNC93AQ86WB7 457 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 TNIP3Q96KP6 325 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 ZSWIM3Q96MP5 696 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 RPP25Q9BUL9 199 aaKnown RBP16.2■□□□□ 0.18
LIG1-219ENST00000600055 IL21Q9HBE4 155 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 TMEM30AQ9NV96 361 aa16.2■□□□□ 0.18
LIG1-219ENST00000600055 MAGED2Q9UNF1 606 aaPredicted RBP16.2■□□□□ 0.18
LIG1-219ENST00000600055 SLC38A8A6NNN8 435 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 PMM2O15305 246 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 CILPO75339 1184 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ALADP13716 330 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 CCDC130P13994 396 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 GABRR2P28476 465 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ZXDAP98168 799 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 HTR4Q13639 388 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 TAF12Q16514 161 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 STXBP5Q5T5C0 1151 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
LIG1-219ENST00000600055 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
LIG1-219ENST00000600055 PAQR9Q6ZVX9 377 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 CRYBG2Q8N1P7 616 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 C12orf29Q8N999 325 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 LEMD2Q8NC56 503 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 LMO3Q8TAP4 145 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 FGF14Q92915 247 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 MED10Q9BTT4 135 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ELOVL4Q9GZR5 314 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ATXN3LQ9H3M9 355 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 FAM49BQ9NUQ9 324 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 ZFP37Q9Y6Q3 630 aaPredicted RBP16.19■□□□□ 0.18
LIG1-219ENST00000600055 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
LIG1-219ENST00000600055 FAM86C2PA6NEL3 165 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 ANHXE9PGG2 379 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 F8VP50 259 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 MICAL2O94851 1124 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 CSH1P0DML2 217 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 CSH2P0DML3 217 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
LIG1-219ENST00000600055 CYP4F8P98187 520 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 CUL2Q13617 745 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 VSTM1Q6UX27 236 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 FAM35AQ86V20 835 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 FUKQ8N0W3 1084 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 NT5C1AQ9BXI3 368 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 CISHQ9NSE2 258 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 SAMSN1Q9NSI8 373 aaKnown RBP16.18■□□□□ 0.18
LIG1-219ENST00000600055 GDE1Q9NZC3 331 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 IGSF9Q9P2J2 1179 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
LIG1-219ENST00000600055 P4HA2O15460 535 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 NARSO43776 548 aaKnown RBP16.17■□□□□ 0.18
LIG1-219ENST00000600055 NOL4O94818 638 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 F11P03951 625 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 TDGQ13569 410 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 STX1AQ16623 288 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 CT47A1Q5JQC4 288 aaPredicted RBP16.17■□□□□ 0.18
LIG1-219ENST00000600055 FAM78AQ5JUQ0 283 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 TMEM150AQ86TG1 271 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 GPIHBP1Q8IV16 184 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 ARHGEF19Q8IW93 802 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms