RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TASP1Q9H6P5 420 aa15.1■□□□□ 0.01
LIG1-218ENST00000599322 VRTNQ9H8Y1 702 aa15.1■□□□□ 0.01
LIG1-218ENST00000599322 THG1LQ9NWX6 298 aaKnown RBP15.1■□□□□ 0.01
LIG1-218ENST00000599322 MYBPHLA2RUH7 354 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 SOBPA7XYQ1 873 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 TRIM66O15016 1216 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 NCAM2O15394 837 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 AKAP3O75969 853 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 PTPN1P18031 435 aaKnown RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 ATF6P18850 670 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 AOC1P19801 751 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 GTF2H1P32780 548 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 AVPR1AP37288 418 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 CDR1P51861 262 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 PSMC1P62191 440 aaKnown RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 FKBP3Q00688 224 aaKnown RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 LRRC63Q05C16 580 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 DDR2Q16832 855 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 ZACNQ401N2 412 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 SLC44A4Q53GD3 710 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 PHLDB3Q6NSJ2 640 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 FAM171BQ6P995 826 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 SV2AQ7L0J3 742 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 TMC8Q8IU68 726 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 KBTBD7Q8WVZ9 684 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 ATOH1Q92858 354 aaPredicted RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 DNASE1L2Q92874 299 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 NELL2Q99435 816 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 MRPL45Q9BRJ2 306 aaKnown RBP15.09■□□□□ 0.01
LIG1-218ENST00000599322 MED10Q9BTT4 135 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 MMRN2Q9H8L6 949 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 TBC1D17Q9HA65 648 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 TRPV4Q9HBA0 871 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 TMLHEQ9NVH6 421 aa15.09■□□□□ 0.01
LIG1-218ENST00000599322 MAN2B1O00754 1011 aa15.08■□□□□ 0
LIG1-218ENST00000599322 GFRA3O60609 400 aa15.08■□□□□ 0
LIG1-218ENST00000599322 LMO2P25791 158 aa15.08■□□□□ 0
LIG1-218ENST00000599322 GDI1P31150 447 aa15.08■□□□□ 0
LIG1-218ENST00000599322 PRCPP42785 496 aa15.08■□□□□ 0
LIG1-218ENST00000599322 PDE6CP51160 858 aa15.08■□□□□ 0
LIG1-218ENST00000599322 UBE2HP62256 183 aa15.08■□□□□ 0
LIG1-218ENST00000599322 DLG4P78352 724 aa15.08■□□□□ 0
LIG1-218ENST00000599322 MLF2Q15773 248 aaPredicted RBP15.08■□□□□ 0
LIG1-218ENST00000599322 COBLL1Q53SF7 1204 aa15.08■□□□□ 0
LIG1-218ENST00000599322 MDH1BQ5I0G3 518 aa15.08■□□□□ 0
LIG1-218ENST00000599322 WDR44Q5JSH3 913 aa15.08■□□□□ 0
LIG1-218ENST00000599322 TCERG1LQ5VWI1 586 aa15.08■□□□□ 0
LIG1-218ENST00000599322 LIMS2Q7Z4I7 341 aa15.08■□□□□ 0
LIG1-218ENST00000599322 ARID3BQ8IVW6 561 aaPredicted RBP15.08■□□□□ 0
LIG1-218ENST00000599322 MFSD6LQ8IWD5 586 aa15.08■□□□□ 0
LIG1-218ENST00000599322 SMYD4Q8IYR2 804 aaPredicted RBP15.08■□□□□ 0
LIG1-218ENST00000599322 MYLPFQ96A32 169 aa15.08■□□□□ 0
LIG1-218ENST00000599322 DHTKD1Q96HY7 919 aaPredicted RBP15.08■□□□□ 0
LIG1-218ENST00000599322 LRRC3Q9BY71 257 aa15.08■□□□□ 0
LIG1-218ENST00000599322 ELOVL4Q9GZR5 314 aa15.08■□□□□ 0
LIG1-218ENST00000599322 SIT1Q9Y3P8 196 aa15.08■□□□□ 0
LIG1-218ENST00000599322 DMDP11532 3685 aa15.07■□□□□ 0
LIG1-218ENST00000599322 BICDL2A1A5D9 508 aa15.07■□□□□ 0
LIG1-218ENST00000599322 SLC38A8A6NNN8 435 aa15.07■□□□□ 0
LIG1-218ENST00000599322 HEPACAM2A8MVW5 462 aa15.07■□□□□ 0
LIG1-218ENST00000599322 ATP2C2O75185 946 aa15.07■□□□□ 0
LIG1-218ENST00000599322 MOSPD3O75425 235 aa15.07■□□□□ 0
LIG1-218ENST00000599322 HLA-DRAP01903 254 aa15.07■□□□□ 0
LIG1-218ENST00000599322 BDNFP23560 247 aa15.07■□□□□ 0
LIG1-218ENST00000599322 GCLMP48507 274 aa15.07■□□□□ 0
LIG1-218ENST00000599322 GRM2Q14416 872 aa15.07■□□□□ 0
LIG1-218ENST00000599322 CWF19L1Q69YN2 538 aaKnown RBP15.07■□□□□ 0
LIG1-218ENST00000599322 KRT39Q6A163 491 aa15.07■□□□□ 0
LIG1-218ENST00000599322 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
LIG1-218ENST00000599322 SCARA5Q6ZMJ2 495 aa15.07■□□□□ 0
LIG1-218ENST00000599322 ZNF852Q6ZMS4 543 aa15.07■□□□□ 0
LIG1-218ENST00000599322 GAREM2Q75VX8 874 aa15.07■□□□□ 0
LIG1-218ENST00000599322 TTC39CQ8N584 583 aa15.07■□□□□ 0
LIG1-218ENST00000599322 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
LIG1-218ENST00000599322 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
LIG1-218ENST00000599322 SPATA17Q96L03 361 aa15.07■□□□□ 0
LIG1-218ENST00000599322 ZSWIM3Q96MP5 696 aa15.07■□□□□ 0
LIG1-218ENST00000599322 XYLT2Q9H1B5 865 aa15.07■□□□□ 0
LIG1-218ENST00000599322 METTL14Q9HCE5 456 aaKnown RBP15.07■□□□□ 0
LIG1-218ENST00000599322 TMEM8AQ9HCN3 771 aa15.07■□□□□ 0
LIG1-218ENST00000599322 ZNF334Q9HCZ1 680 aaPredicted RBP15.07■□□□□ 0
LIG1-218ENST00000599322 OBP2AQ9NY56 170 aa15.07■□□□□ 0
LIG1-218ENST00000599322 ZFHX2Q9C0A1 2572 aaPredicted RBP15.07■□□□□ 0
LIG1-218ENST00000599322 KRBA1A5PL33 1030 aa15.06■□□□□ 0
LIG1-218ENST00000599322 PROB1E7EW31 1015 aa15.06■□□□□ 0
LIG1-218ENST00000599322 SLC16A3O15427 465 aaKnown RBP15.06■□□□□ 0
LIG1-218ENST00000599322 NOL4O94818 638 aa15.06■□□□□ 0
LIG1-218ENST00000599322 FGFR1OPO95684 399 aaKnown RBP15.06■□□□□ 0
LIG1-218ENST00000599322 CCNE1P24864 410 aa15.06■□□□□ 0
LIG1-218ENST00000599322 WEE1P30291 646 aa15.06■□□□□ 0
LIG1-218ENST00000599322 VIPR2P41587 438 aa15.06■□□□□ 0
LIG1-218ENST00000599322 PPP3CCP48454 512 aa15.06■□□□□ 0
LIG1-218ENST00000599322 NLRP12P59046 1061 aa15.06■□□□□ 0
LIG1-218ENST00000599322 STARD6P59095 220 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CYP4F8P98187 520 aa15.06■□□□□ 0
LIG1-218ENST00000599322 PLCB2Q00722 1185 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CETN1Q12798 172 aa15.06■□□□□ 0
LIG1-218ENST00000599322 UBXN2BQ14CS0 331 aa15.06■□□□□ 0
LIG1-218ENST00000599322 ARHGAP29Q52LW3 1261 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms