RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 PPP1R26Q5T8A7 1209 aaPredicted RBP23.2■■□□□ 1.3
LTBP4-224ENST00000599016 MICAL1Q8TDZ2 1067 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 SLC20A1Q8WUM9 679 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 AUTS2Q8WXX7 1259 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 CCDC42Q96M95 316 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 TMEM209Q96SK2 561 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 CHP1Q99653 195 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 LPIN3Q9BQK8 851 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 RXFP1Q9HBX9 757 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 SEPT11Q9NVA2 429 aaKnown RBP23.2■■□□□ 1.3
LTBP4-224ENST00000599016 ARHGAP20Q9P2F6 1191 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 HESX1Q9UBX0 185 aa23.2■■□□□ 1.3
LTBP4-224ENST00000599016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 ADORA2BP29275 332 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 OR1D2P34982 312 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 EIF4A3P38919 411 aaKnown RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 NDUFV1P49821 464 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 ERVFC1P60507 584 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 CYP27A1Q02318 531 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 MAPK8IP2Q13387 824 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 PLPP4Q5VZY2 271 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 SLC8B1Q6J4K2 584 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 LCLAT1Q6UWP7 414 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 ZNF571Q7Z3V5 609 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 SPATA2LQ8IUW3 424 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 DDX1Q92499 740 aaKnown RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 PKMYT1Q99640 499 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 HNRNPABQ99729 332 aaKnown RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 CLSTN3Q9BQT9 956 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 EMILIN2Q9BXX0 1053 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 NHEJ1Q9H9Q4 299 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-224ENST00000599016 TSPAN16Q9UKR8 245 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 PCDHGC3Q9UN70 934 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.19■■□□□ 1.37e-6■■□□□ 11.9
LTBP4-224ENST00000599016 CEP83Q9Y592 693 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 IRAK3Q9Y616 596 aa23.19■■□□□ 1.3
LTBP4-224ENST00000599016 PTPRDP23468 1912 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 TNFRSF10AO00220 468 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 O00370 1275 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 LILRB3O75022 631 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 MMEP08473 750 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 PLEKP08567 350 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-224ENST00000599016 OR4Q2P0C623 313 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 CCDC130P13994 396 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 RPL17P18621 184 aaKnown RBP23.18■■□□□ 1.3
LTBP4-224ENST00000599016 DNAJB1P25685 340 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 GPR17Q13304 367 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 GOLGA7BQ2TAP0 167 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 TJAP1Q5JTD0 557 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 RSPO2Q6UXX9 243 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-224ENST00000599016 TRIM72Q6ZMU5 477 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 LRRTM3Q86VH5 581 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 SLC2A14Q8TDB8 520 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 C2orf15Q8WU43 125 aaKnown RBP23.18■■□□□ 1.3
LTBP4-224ENST00000599016 MYLPFQ96A32 169 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 PCED1BQ96HM7 432 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 B3GNT5Q9BYG0 378 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 PCDHB5Q9Y5E4 795 aa23.18■■□□□ 1.3
LTBP4-224ENST00000599016 FSCN2O14926 492 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 AKR1B10O60218 316 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 MICAL2O94851 1124 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 CHRNB2P17787 502 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 CYLC1P35663 651 aaPredicted RBP23.17■■□□□ 1.3
LTBP4-224ENST00000599016 SLC8A3P57103 927 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 FMO1Q01740 532 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 GLYCTKQ8IVS8 523 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 CCDC170Q8IYT3 715 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 ZSWIM1Q9BR11 485 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 TMLHEQ9NVH6 421 aa23.17■■□□□ 1.3
LTBP4-224ENST00000599016 TMEM265A0A087WTH1 108 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 M0QYV0 167 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 CSPG5O95196 566 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 ADH1AP07327 375 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 ROR1Q01973 937 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 RAB33AQ14088 237 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 TPGS2Q68CL5 300 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 FAM35AQ86V20 835 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 TMEM139Q8IV31 216 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 FUKQ8N0W3 1084 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 MRPL43Q8N983 215 aaKnown RBP23.16■■□□□ 1.3
LTBP4-224ENST00000599016 ANKRD52Q8NB46 1076 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 SPPL2BQ8TCT7 592 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 SMARCD1Q96GM5 515 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 FUBP3Q96I24 572 aaKnown RBP eCLIP23.16■■□□□ 1.3
LTBP4-224ENST00000599016 SYT11Q9BT88 431 aa23.16■■□□□ 1.3
LTBP4-224ENST00000599016 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-224ENST00000599016 C2orf71A6NGG8 1288 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 TEX28O15482 410 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 ADAM12O43184 909 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 LSM8O95777 96 aaKnown RBP23.15■■□□□ 1.3
LTBP4-224ENST00000599016 FAM200BP0CF97 657 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 SSTR3P32745 418 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-224ENST00000599016 BCAT1P54687 386 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 PTPROQ16827 1216 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 CCDC142Q17RM4 750 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 TMEM35BQ8NCS4 154 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 GDPD5Q8WTR4 605 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 KLHL5Q96PQ7 755 aa23.15■■□□□ 1.3
LTBP4-224ENST00000599016 ZNF518BQ9C0D4 1074 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms