RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 WARSP23381 471 aaKnown RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 PCSK1P29120 753 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CCR2P41597 374 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 EPHB3P54753 998 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CCZ1BP86790 482 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 DMTNQ08495 405 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 PLD1Q13393 1074 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 ORC1Q13415 861 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CCAR2Q8N163 923 aaKnown RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 SPPL2BQ8TCT7 592 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 PKMYT1Q99640 499 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 MKNK1Q9BUB5 465 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 ZNF334Q9HCZ1 680 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 MAFFQ9ULX9 164 aa12.89□□□□□ -0.35
ZNF548-209ENST00000598895 A8MXQ7 604 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 SLC16A3O15427 465 aaKnown RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 POU2F2P09086 479 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 CYP2F1P24903 491 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 PPP1R2P41236 205 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 ZXDAP98168 799 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 PAK1Q13153 545 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 DDR2Q16832 855 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 POTEHQ6S545 545 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 SCN4BQ8IWT1 228 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 TRIML1Q8N9V2 468 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 ZNF397Q8NF99 534 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 C2orf15Q8WU43 125 aaKnown RBP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 TSC1Q92574 1164 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 MYLPFQ96A32 169 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 KCNK12Q9HB15 430 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 ASAH2Q9NR71 780 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZNF548-209ENST00000598895 CDH9Q9ULB4 789 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
ZNF548-209ENST00000598895 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 TACC1O75410 805 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 MXI1P50539 228 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 VEPH1Q14D04 833 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 TEAD2Q15562 447 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 TAF12Q16514 161 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 NFE2Q16621 373 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 KRT39Q6A163 491 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 PARM1Q6UWI2 310 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 DNAJB7Q7Z6W7 309 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 TMC8Q8IU68 726 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 EDAQ92838 391 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 FGF14Q92915 247 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 KXD1Q9BQD3 176 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 RPP25Q9BUL9 199 aaKnown RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 IMPG2Q9BZV3 1241 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 EPS15L1Q9UBC2 864 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 HMGXB4Q9UGU5 601 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-209ENST00000598895 NUMBLQ9Y6R0 609 aa12.87□□□□□ -0.35
ZNF548-209ENST00000598895 CLDN5O00501 218 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 STX10O60499 249 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 MOSPD3O75425 235 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 PTPN1P18031 435 aaKnown RBP12.86□□□□□ -0.35
ZNF548-209ENST00000598895 CD58P19256 250 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 BDNFP23560 247 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 GABRR2P28476 465 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 ASPAP45381 313 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 FAM193AP78312 1265 aa12.86□□□□□ -0.35
ZNF548-209ENST00000598895 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
ZNF548-209ENST00000598895 CYP4F8P98187 520 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms