RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 MAGEA11P43364 429 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 GPR15P49685 360 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 NDUFA8P51970 172 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 FZD5Q13467 585 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 C1orf228Q6PIY5 440 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 ASCL5Q7RTU5 278 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 TMEM150AQ86TG1 271 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 CMTM8Q8IZV2 173 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 CELF5Q8N6W0 485 aaKnown RBP24.63■■□□□ 1.53
SSBP4-205ENST00000598159 BPIFB1Q8TDL5 484 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 MSANTD3Q96H12 275 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 SYT15Q9BQS2 421 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 KCTD10Q9H3F6 313 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 C8orf33Q9H7E9 229 aaPredicted RBP24.63■■□□□ 1.53
SSBP4-205ENST00000598159 MAGED2Q9UNF1 606 aaPredicted RBP24.63■■□□□ 1.53
SSBP4-205ENST00000598159 PIAS3Q9Y6X2 628 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 TICRRQ7Z2Z1 1910 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 F5P12259 2224 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 PRR23AA6NEV1 266 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 LAMTOR5O43504 91 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 HCRTO43612 131 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 PHACTR2O75167 634 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 KIF20AO95235 890 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 PDGFRBP09619 1106 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 WDR72Q3MJ13 1102 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 SDHAF4Q5VUM1 108 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 PARD3BQ8TEW8 1205 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 MRPS31Q92665 395 aaKnown RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 SYAP1Q96A49 352 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 TRMT2BQ96GJ1 504 aaKnown RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 MYRFLQ96LU7 910 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 LRRC3BQ96PB8 259 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 GZF1Q9H116 711 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 SNX25Q9H3E2 840 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 THG1LQ9NWX6 298 aaKnown RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 FBXO4Q9UKT5 387 aa24.62■■□□□ 1.53
SSBP4-205ENST00000598159 NDRG2Q9UN36 371 aaKnown RBP24.62■■□□□ 1.53
SSBP4-205ENST00000598159 SLC38A8A6NNN8 435 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 ATP2C2O75185 946 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 NOL4O94818 638 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 AVPR1AP37288 418 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 TNNC1P63316 161 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 CLDN10P78369 228 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 PLCB2Q00722 1185 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 BECN1Q14457 450 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 ZNF528Q3MIS6 628 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 ZC3H14Q6PJT7 736 aaKnown RBP24.61■■□□□ 1.53
SSBP4-205ENST00000598159 VSTM1Q6UX27 236 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 MAML2Q8IZL2 1156 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-205ENST00000598159 ZNF687Q8N1G0 1237 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 MAB21L3Q8N8X9 362 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 CEP295NLQ96MC4 621 aa24.61■■□□□ 1.53
SSBP4-205ENST00000598159 ZNF638Q14966 1978 aaKnown RBP24.6■■□□□ 1.53
SSBP4-205ENST00000598159 RHOBTB3O94955 611 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 KPNA1P52294 538 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-205ENST00000598159 MYL6P60660 151 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 MON1AQ86VX9 555 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 SCN4BQ8IWT1 228 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 FSIP1Q8NA03 581 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 OR6B3Q8NGW1 331 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 CRTAC1Q9NQ79 661 aa24.6■■□□□ 1.53
SSBP4-205ENST00000598159 CALUO43852 315 aaPredicted RBP24.59■■□□□ 1.53
SSBP4-205ENST00000598159 PRAMEF12O95522 483 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 CCNE1P24864 410 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 PSMC1P62191 440 aaKnown RBP24.59■■□□□ 1.53
SSBP4-205ENST00000598159 MAMSTRQ6ZN01 415 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 KRBA2Q6ZNG9 492 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 MYCBPAPQ8TBZ2 947 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 PLEKHO2Q8TD55 490 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 SPATA17Q96L03 361 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 MRPL45Q9BRJ2 306 aaKnown RBP24.59■■□□□ 1.53
SSBP4-205ENST00000598159 IER2Q9BTL4 223 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 XYLT2Q9H1B5 865 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 VRTNQ9H8Y1 702 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 LMAN1LQ9HAT1 526 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 TDP1Q9NUW8 608 aa24.59■■□□□ 1.53
SSBP4-205ENST00000598159 COL4A2P08572 1712 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 ZNF202O95125 648 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 C4BPAP04003 597 aaKnown RBP24.58■■□□□ 1.53
SSBP4-205ENST00000598159 NR3C1P04150 777 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 BDNFP23560 247 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 CASP4P49662 377 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 CYP27A1Q02318 531 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 DPYDQ12882 1025 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 CCDC142Q17RM4 750 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 TXNDC8Q6A555 127 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 RALGPS2Q86X27 583 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-205ENST00000598159 MYLPFQ96A32 169 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 CCDC34Q96HJ3 373 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 KIF9Q9HAQ2 790 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 NXF1Q9UBU9 619 aaKnown RBP24.58■■□□□ 1.53
SSBP4-205ENST00000598159 TRAF3IP3Q9Y228 551 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 FRMD4BQ9Y2L6 1034 aa24.58■■□□□ 1.53
SSBP4-205ENST00000598159 ZFHX2Q9C0A1 2572 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-205ENST00000598159 LRRIQ3A6PVS8 624 aaPredicted RBP24.57■■□□□ 1.52
SSBP4-205ENST00000598159 PTPN1P18031 435 aaKnown RBP24.57■■□□□ 1.52
SSBP4-205ENST00000598159 GRIK1P39086 918 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 CSTF1Q05048 431 aaKnown RBP24.57■■□□□ 1.52
SSBP4-205ENST00000598159 BIRC3Q13489 604 aa24.57■■□□□ 1.52
SSBP4-205ENST00000598159 TDRD10Q5VZ19 366 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms