RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 PDE6CP51160 858 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 CDR1P51861 262 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 DDR2Q16832 855 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 SOWAHAQ2M3V2 549 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 SHC4Q6S5L8 630 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 EPM2AIP1Q7L775 607 aaPredicted RBP15.04■□□□□ -0
C19orf54-206ENST00000596940 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 GOLGA5Q8TBA6 731 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 MMS19Q96T76 1030 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 AGPAT3Q9NRZ7 376 aa15.04■□□□□ -0
C19orf54-206ENST00000596940 MAGEC2Q9UBF1 373 aaPredicted RBP15.04■□□□□ -0
C19orf54-206ENST00000596940 ATG13O75143 517 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 F13A1P00488 732 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 SOX9P48436 509 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 GRSF1Q12849 480 aaKnown RBP eCLIP15.03■□□□□ -0
C19orf54-206ENST00000596940 RUNX3Q13761 415 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 PUM1Q14671 1186 aaKnown RBP eCLIP15.03■□□□□ -0
C19orf54-206ENST00000596940 PDGFRLQ15198 375 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 TXNDC8Q6A555 127 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 FAM171BQ6P995 826 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 TRAPPC11Q7Z392 1133 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 LIMS2Q7Z4I7 341 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 TMEM150AQ86TG1 271 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 SCN4BQ8IWT1 228 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 CEP57L1Q8IYX8 460 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 DCLK2Q8N568 766 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 OR5B17Q8NGF7 314 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 TTC8Q8TAM2 541 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 USP13Q92995 863 aaPredicted RBP15.03■□□□□ -0
C19orf54-206ENST00000596940 HPS3Q969F9 1004 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 PKMYT1Q99640 499 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 SYT15Q9BQS2 421 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 SMG9Q9H0W8 520 aaKnown RBP15.03■□□□□ -0
C19orf54-206ENST00000596940 SNX25Q9H3E2 840 aa15.03■□□□□ -0
C19orf54-206ENST00000596940 TRAV19A0A0A6YYK7 116 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 PRR5-ARHGAP8B1AHC4 643 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 USP17L7P0C7H9 530 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 DLATP10515 647 aaKnown RBP15.02■□□□□ -0
C19orf54-206ENST00000596940 TDGF1P13385 188 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 PFKLP17858 780 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 WARSP23381 471 aaKnown RBP15.02■□□□□ -0
C19orf54-206ENST00000596940 ANXA13P27216 316 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 HOXA6P31267 233 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 HOXD13P35453 343 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 ARHGAP8P85298 464 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 FAM160A1Q05DH4 1040 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 TRPC3Q13507 836 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 PSMD6Q15008 389 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 PON2Q15165 354 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 FOXD4L5Q5VV16 416 aaPredicted RBP15.02■□□□□ -0
C19orf54-206ENST00000596940 LMBRD2Q68DH5 695 aaPredicted RBP15.02■□□□□ -0
C19orf54-206ENST00000596940 RDH13Q8NBN7 331 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 GLIS3Q8NEA6 775 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 FOXD4L4Q8WXT5 416 aaPredicted RBP15.02■□□□□ -0
C19orf54-206ENST00000596940 SPATA17Q96L03 361 aa15.02■□□□□ -0
C19orf54-206ENST00000596940 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 TACC1O75410 805 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CKMP06732 381 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 ATICP31939 592 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 GNL1P36915 607 aaPredicted RBP15.01□□□□□ -0.01
C19orf54-206ENST00000596940 GRIK1P39086 918 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 PPP3CCP48454 512 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 GPR15P49685 360 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CYP2J2P51589 502 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 AP3M2P53677 418 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 TNNC1P63316 161 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 SATB1Q01826 763 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 LMNB2Q03252 620 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 TNK2Q07912 1038 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 NR1H3Q13133 447 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CCINQ13939 588 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 KCNB1Q14721 858 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 KNOP1Q1ED39 458 aaKnown RBP15.01□□□□□ -0.01
C19orf54-206ENST00000596940 SDHAF4Q5VUM1 108 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 RESP18Q5W5W9 173 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 LAIR1Q6GTX8 287 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 TXNDC11Q6PKC3 985 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 DGLUCYQ7Z3D6 616 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 LONP2Q86WA8 852 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 OSTM1Q86WC4 334 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 C12orf56Q8IXR9 622 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CPA6Q8N4T0 437 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CCDC26Q8TAB7 109 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 SCFD1Q8WVM8 642 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CCDC127Q96BQ5 260 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 RMDN1Q96DB5 314 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 TRPC7Q9HCX4 862 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 RBM12Q9NTZ6 932 aaKnown RBP15.01□□□□□ -0.01
C19orf54-206ENST00000596940 PCDHA7Q9UN72 937 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 MIA3Q5JRA6 1907 aa15.01□□□□□ -0.01
C19orf54-206ENST00000596940 SCN1AP35498 2009 aa15□□□□□ -0.01
C19orf54-206ENST00000596940 PTPRJQ12913 1337 aa15□□□□□ -0.01
C19orf54-206ENST00000596940 TRDMT1O14717 391 aaKnown RBP15□□□□□ -0.01
C19orf54-206ENST00000596940 TRIM66O15016 1216 aa15□□□□□ -0.01
C19orf54-206ENST00000596940 CLIC2O15247 247 aa15□□□□□ -0.01
C19orf54-206ENST00000596940 FOXD2O60548 495 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms