RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SPAG17Q6Q759 2223 aa17.11■□□□□ 0.33
LINC02560-201ENST00000596379 HCRTO43612 131 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 GDF9O60383 454 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 ATG13O75143 517 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 NOL4O94818 638 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 PRPF6O94906 941 aaKnown RBP17.1■□□□□ 0.33
LINC02560-201ENST00000596379 EGFP01133 1207 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 GALK1P51570 392 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 RBP5P82980 135 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 AMPD2Q01433 879 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 RESTQ13127 1097 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 CCDC142Q17RM4 750 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 GDAP2Q9NXN4 497 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 UXTQ9UBK9 157 aaPredicted RBP17.1■□□□□ 0.33
LINC02560-201ENST00000596379 SIX4Q9UIU6 781 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 SLC8A2Q9UPR5 921 aa17.1■□□□□ 0.33
LINC02560-201ENST00000596379 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 AXIN1O15169 862 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 TADA3O75528 432 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 STAT6P42226 847 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 LHX1P48742 406 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 ALCAMQ13740 583 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
LINC02560-201ENST00000596379 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
LINC02560-201ENST00000596379 TOP6BLQ8N6T0 577 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 TRMT2BQ96GJ1 504 aaKnown RBP17.09■□□□□ 0.33
LINC02560-201ENST00000596379 MYRFLQ96LU7 910 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 MTMR12Q9C0I1 747 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 TRPC7Q9HCX4 862 aa17.09■□□□□ 0.33
LINC02560-201ENST00000596379 POLR3BQ9NW08 1133 aaPredicted RBP17.09■□□□□ 0.33
LINC02560-201ENST00000596379 GREB1Q4ZG55 1949 aa17.08■□□□□ 0.33
LINC02560-201ENST00000596379 ANAPC1Q9H1A4 1944 aa17.08■□□□□ 0.33
LINC02560-201ENST00000596379 A0A087X0B3 334 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 CCDC163A0A0D9SF12 145 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 GABRDO14764 452 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 RNF40O75150 1001 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
LINC02560-201ENST00000596379 TMEM191BP0C7N4 346 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 SYT1P21579 422 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 GJA4P35212 333 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 SOWAHAQ2M3V2 549 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 PPM1JQ5JR12 505 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 LMBRD2Q68DH5 695 aaPredicted RBP17.08■□□□□ 0.32
LINC02560-201ENST00000596379 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
LINC02560-201ENST00000596379 CACNA2D4Q7Z3S7 1137 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 SCN4BQ8IWT1 228 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 ADGRF2Q8IZF7 708 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 GPD1LQ8N335 351 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 GAB3Q8WWW8 586 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 SLC22A12Q96S37 553 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 P2RY13Q9BPV8 354 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 ARRDC1-AS1Q9H2J1 176 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 DUS2Q9NX74 493 aaKnown RBP17.08■□□□□ 0.32
LINC02560-201ENST00000596379 EML5Q05BV3 1969 aa17.08■□□□□ 0.32
LINC02560-201ENST00000596379 FOXD2O60548 495 aaPredicted RBP17.07■□□□□ 0.32
LINC02560-201ENST00000596379 ATP2C2O75185 946 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 ADRB1P08588 477 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 USP17L7P0C7H9 530 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 DRD1P21728 446 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 PCSK1P29120 753 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 MTF1Q14872 753 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 CCDC6Q16204 474 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 FAM171BQ6P995 826 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 ECT2Q9H8V3 914 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
LINC02560-201ENST00000596379 R3HCC1Q9Y3T6 440 aaKnown RBP17.07■□□□□ 0.32
LINC02560-201ENST00000596379 TRAV19A0A0A6YYK7 116 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 CKMP06732 381 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 LMO2P25791 158 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 ZNF77Q15935 545 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 PDILTQ8N807 584 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 ARL14EPQ8N8R7 260 aaPredicted RBP17.06■□□□□ 0.32
LINC02560-201ENST00000596379 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
LINC02560-201ENST00000596379 FUBP3Q96I24 572 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC02560-201ENST00000596379 HPDLQ96IR7 371 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms