RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 IQCB1Q15051 598 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 TRIM65Q6PJ69 517 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 ARHGEF19Q8IW93 802 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 FAM200AQ8TCP9 573 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 CORO1BQ9BR76 489 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 B3GNT5Q9BYG0 378 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 ELOVL4Q9GZR5 314 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 VPS16Q9H269 839 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 HSD3B7Q9H2F3 369 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 HCFC1R1Q9NWW0 138 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
LIG1-208ENST00000595758 PRKAG3Q9UGI9 489 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 LIMA1Q9UHB6 759 aaKnown RBP15.28■□□□□ 0.04
LIG1-208ENST00000595758 ASB3Q9Y575 518 aa15.28■□□□□ 0.04
LIG1-208ENST00000595758 ATP8B3O60423 1300 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 CLUHO75153 1309 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 ATF6P18850 670 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 PON1P27169 355 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 COPB1P53618 953 aaKnown RBP15.27■□□□□ 0.04
LIG1-208ENST00000595758 GCNT1Q02742 428 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 VEPH1Q14D04 833 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 DDR2Q16832 855 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 PABPC1LQ4VXU2 614 aaKnown RBP15.27■□□□□ 0.04
LIG1-208ENST00000595758 ZNF394Q53GI3 561 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 PHLDB3Q6NSJ2 640 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 VSTM1Q6UX27 236 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 DNAJB7Q7Z6W7 309 aaPredicted RBP15.27■□□□□ 0.04
LIG1-208ENST00000595758 ITIH5Q86UX2 942 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 SCN4BQ8IWT1 228 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 ADHFE1Q8IWW8 467 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 GIPC2Q8TF65 315 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 KAT5Q92993 513 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.04
LIG1-208ENST00000595758 MED10Q9BTT4 135 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 CBX8Q9HC52 389 aa15.27■□□□□ 0.04
LIG1-208ENST00000595758 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.04
LIG1-208ENST00000595758 XIRP2A4UGR9 3374 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 TCF20Q9UGU0 1960 aaKnown RBP15.26■□□□□ 0.03
LIG1-208ENST00000595758 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 CLDN5O00501 218 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 RHOP08100 348 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ACO1P21399 889 aaKnown RBP15.26■□□□□ 0.03
LIG1-208ENST00000595758 FSHRP23945 695 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 GRIK1P39086 918 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 GPR15P49685 360 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 RAD23BP54727 409 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ZP2Q05996 745 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 TAF12Q16514 161 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 CYP4A22Q5TCH4 519 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 SDHAF4Q5VUM1 108 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ENOSF1Q7L5Y1 443 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 UBR7Q8N806 425 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 SLC4A11Q8NBS3 891 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 SLC2A14Q8TDB8 520 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 GPR152Q8TDT2 470 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 PSMG2Q969U7 264 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 FAM81BQ96LP2 452 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 KREMEN1Q96MU8 473 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ASAH2Q9NR71 780 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 NR2E1Q9Y466 385 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 PCDHB4Q9Y5E5 795 aa15.26■□□□□ 0.03
LIG1-208ENST00000595758 ZNF197O14709 1029 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 MYL4P12829 197 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 CCDC130P13994 396 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 SP100P23497 879 aaPredicted RBP15.25■□□□□ 0.03
LIG1-208ENST00000595758 ANXA13P27216 316 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 MFAP3P55082 362 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 TPM4P67936 248 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 APBA1Q02410 837 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 TMEM270Q6UE05 265 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 PDZD4Q76G19 769 aaPredicted RBP15.25■□□□□ 0.03
LIG1-208ENST00000595758 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 LUZP1Q86V48 1076 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 LEMD2Q8NC56 503 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 CYFIP2Q96F07 1278 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 HNRNPABQ99729 332 aaKnown RBP15.25■□□□□ 0.03
LIG1-208ENST00000595758 AVENQ9NQS1 362 aaPredicted RBP15.25■□□□□ 0.03
LIG1-208ENST00000595758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIG1-208ENST00000595758 APEX2Q9UBZ4 518 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
LIG1-208ENST00000595758 MRPS23Q9Y3D9 190 aaKnown RBP15.25■□□□□ 0.03
LIG1-208ENST00000595758 C2orf16Q68DN1 1984 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 LGALS16A8MUM7 142 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 F8VP50 259 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 TRIM66O15016 1216 aa15.24■□□□□ 0.03
LIG1-208ENST00000595758 AP1G2O75843 785 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms