RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 WRNIP1Q96S55 665 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 CLUHO75153 1309 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 TYROBPO43914 113 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 ADCY3O60266 1144 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 ATG7O95352 703 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 LINGO3P0C6S8 592 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
LIG1-206ENST00000594067 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.36
LIG1-206ENST00000594067 OAZ1P54368 228 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 RAD23BP54727 409 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.36
LIG1-206ENST00000594067 CNTN2Q02246 1040 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 FNBP1LQ5T0N5 605 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 LVRNQ6Q4G3 990 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 NIF3L1Q9GZT8 377 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 SENP1Q9P0U3 644 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
LIG1-206ENST00000594067 COL11A1P12107 1806 aaPredicted RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 EIF4E1BA6NMX2 242 aaKnown RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 E7ENQ6 273 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 STAM2O75886 525 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 KRT4P19013 534 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PSMA2P25787 234 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PTPN7P35236 360 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 SLC18A1P54219 525 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 STXBP2Q15833 593 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 DENND1BQ6P3S1 775 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 WDR49Q8IV35 697 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 JOSD2Q8TAC2 188 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 SLC24A2Q9UI40 661 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 MYH9P35579 1960 aaKnown RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 WDR91A4D1P6 747 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 C3orf70A6NLC5 250 aaPredicted RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 CST8O60676 142 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PEX10O60683 326 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 DCTN3O75935 186 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PEX19P40855 299 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 EFHC2Q5JST6 749 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 LONP2Q86WA8 852 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PYROXD1Q8WU10 500 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 C10orf82Q8WW14 230 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 CPT1BQ92523 772 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 PCYT2Q99447 389 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 NIFKQ9BYG3 293 aaKnown RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
LIG1-206ENST00000594067 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 RABGEF1Q9UJ41 708 aa17.32■□□□□ 0.36
LIG1-206ENST00000594067 CBX6O95503 412 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 IL1R2P27930 398 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 EPHB2P29323 1055 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ALDH3A1P30838 453 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 GEMIN4P57678 1058 aaKnown RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 TRPC3Q13507 836 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 TRIM68Q6AZZ1 485 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ZNF449Q6P9G9 518 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ARFGAP1Q8N6T3 406 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 TEX9Q8N6V9 391 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ENDOVQ8N8Q3 282 aaKnown RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 KCNN1Q92952 543 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 NUDCD1Q96RS6 583 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 OSBPL1AQ9BXW6 950 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 FAM189A1O60320 539 aa17.31■□□□□ 0.36
LIG1-206ENST00000594067 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 ZNF75CPQ92670 426 aaPredicted RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 KLF6Q99612 283 aaPredicted RBP17.31■□□□□ 0.36
LIG1-206ENST00000594067 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 GOLGA8RI6L899 631 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
LIG1-206ENST00000594067 CD48P09326 243 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 CD19P15391 556 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 TAP1Q03518 808 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 SGSM1Q2NKQ1 1148 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 PTPN20Q4JDL3 420 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 C3orf62Q6ZUJ4 267 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 OTOAQ7RTW8 1153 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 EMC1Q8N766 993 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 NIPA2Q8N8Q9 360 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 WDR83Q9BRX9 315 aaKnown RBP17.3■□□□□ 0.36
LIG1-206ENST00000594067 LRCH4O75427 683 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 UPP2O95045 317 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 KRT3P12035 628 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 EIF4BP23588 611 aaKnown RBP17.3■□□□□ 0.36
LIG1-206ENST00000594067 ADRA1DP25100 572 aa17.3■□□□□ 0.36
LIG1-206ENST00000594067 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms