RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 GPNMBQ14956 572 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 TIGD5Q53EQ6 642 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 CCDC70Q6NSX1 233 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 CREG2Q8IUH2 290 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 THEM5Q8N1Q8 247 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 ANKRD52Q8NB46 1076 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 HASPINQ8TF76 798 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 CPXM1Q96SM3 734 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 MED10Q9BTT4 135 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 PRDM5Q9NQX1 630 aaPredicted RBP15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 V9GYY5 206 aaPredicted RBP15.76■□□□□ 0.11
GTF2F1-202ENST00000593678 GABRDO14764 452 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 CEP104O60308 925 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 KRT3P12035 628 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 CCDC130P13994 396 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 DESP17661 470 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 PTPN1P18031 435 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 LLGL2Q6P1M3 1020 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 CNKSR3Q6P9H4 555 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 NPAS4Q8IUM7 802 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 NAP1L3Q99457 506 aaPredicted RBP15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 SYT15Q9BQS2 421 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 TIMM13Q9Y5L4 95 aaPredicted RBP15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 KIAA0100Q14667 2235 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-202ENST00000593678 PROSCO94903 275 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 BRCC3P46736 316 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 GABRB2P47870 512 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 GSCP56915 257 aaPredicted RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 DSC1Q08554 894 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 OSTM1Q86WC4 334 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 STK32AQ8WU08 396 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 CARD9Q9H257 536 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 CYTH4Q9UIA0 394 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 NME7Q9Y5B8 376 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 M0QZQ0 153 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 PGRMC1O00264 195 aaKnown RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 HCRTO43612 131 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 TADA2AO75478 443 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 DDHD2O94830 711 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 ERBB2P04626 1255 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 PIGHQ14442 188 aaPredicted RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 ERCC6LQ2NKX8 1250 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 MDH1BQ5I0G3 518 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 FAM102AQ5T9C2 384 aaPredicted RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 SEL1L2Q5TEA6 688 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 OVOS1Q6IE37 1185 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 OR6B2Q6IFH4 312 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 TTC30AQ86WT1 665 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 XYLT1Q86Y38 959 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 COLGALT2Q8IYK4 626 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 LRRN4CLQ8ND94 238 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 SUSD3Q96L08 255 aa15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 HNRNPABQ99729 332 aaKnown RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 PRG3Q9Y2Y8 225 aaPredicted RBP15.74■□□□□ 0.11
GTF2F1-202ENST00000593678 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TMEM191CA6NGB0 347 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 SIGLEC16A6NMB1 481 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 E5RJQ4 531 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TMEM189-UBE2V1I3L0A0 370 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 I3L4J1 428 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 CYP11A1P05108 521 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 RAG1P15918 1043 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TYMPP19971 482 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 CTNNA2P26232 953 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 MAN1A1P33908 653 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 CTNNA1P35221 906 aaKnown RBP15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 ACADSBP45954 432 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 RGS7P49802 495 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 RWDD2BP57060 319 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TSPY1Q01534 308 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 ITIH3Q06033 890 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 PDE4CQ08493 712 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 LRRC26Q2I0M4 334 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 ACBD6Q9BR61 282 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 USTQ9Y2C2 406 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TET1Q8NFU7 2136 aa15.73■□□□□ 0.11
GTF2F1-202ENST00000593678 TBKBP1A7MCY6 615 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 DDX3YO15523 660 aaKnown RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 ALDH2P05091 517 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 IGFBP6P24592 240 aaPredicted RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 RPL7AP62424 266 aaKnown RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 YWHAHQ04917 246 aaPredicted RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 MAPRE1Q15691 268 aaKnown RBP15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 ELF2Q15723 593 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 PKDCCQ504Y2 493 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 PMF1Q6P1K2 205 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 LRRC43Q8N309 656 aa15.72■□□□□ 0.11
GTF2F1-202ENST00000593678 ACTRT1Q8TDG2 376 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms