RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 DMWDQ09019 674 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 E2F4Q16254 413 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 DUOXA2Q1HG44 320 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 SOWAHAQ2M3V2 549 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 DGKKQ5KSL6 1271 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 CC2D1AQ6P1N0 951 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-243ENST00000593128 SHC4Q6S5L8 630 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 ERMP1Q7Z2K6 904 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 DGLUCYQ7Z3D6 616 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 SPEM1Q8N4L4 309 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 NELL1Q92832 810 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 USP13Q92995 863 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-243ENST00000593128 CCDC127Q96BQ5 260 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 BLZF1Q9H2G9 400 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 CUEDC2Q9H467 287 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 TDP1Q9NUW8 608 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 GDAP2Q9NXN4 497 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 DCHS1Q96JQ0 3298 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 EP300Q09472 2414 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-243ENST00000593128 ZNF292O60281 2723 aa19.23■□□□□ 0.67
CIRBP-243ENST00000593128 POLR2DO15514 142 aaKnown RBP19.22■□□□□ 0.67
CIRBP-243ENST00000593128 PDGFRBP09619 1106 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 TNNI1P19237 187 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 HOXD13P35453 343 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 ME1P48163 572 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 CYP27A1Q02318 531 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 SURF1Q15526 300 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 WDR44Q5JSH3 913 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-243ENST00000593128 FNBP1Q96RU3 617 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 SYT15Q9BQS2 421 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 ABCB6Q9NP58 842 aa19.22■□□□□ 0.67
CIRBP-243ENST00000593128 UXTQ9UBK9 157 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-243ENST00000593128 EIF3DO15371 548 aaKnown RBP eCLIP19.21■□□□□ 0.67
CIRBP-243ENST00000593128 CKMP06732 381 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 TDGF1P13385 188 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 WEE1P30291 646 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 AFMP43652 599 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 SRSF5Q13243 272 aaKnown RBP19.21■□□□□ 0.67
CIRBP-243ENST00000593128 RUNX3Q13761 415 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 SNRNP35Q16560 246 aaKnown RBP19.21■□□□□ 0.67
CIRBP-243ENST00000593128 RSPO4Q2I0M5 234 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-243ENST00000593128 MON1AQ86VX9 555 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 MYLPFQ96A32 169 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 KIAA1586Q9HCI6 787 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 AGPAT3Q9NRZ7 376 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 FAM13BQ9NYF5 915 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-243ENST00000593128 ZMYM5Q9UJ78 669 aa19.21■□□□□ 0.67
CIRBP-243ENST00000593128 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-243ENST00000593128 ARSAP15289 507 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 LMO2P25791 158 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 GRIK1P39086 918 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 SIM2Q14190 667 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-243ENST00000593128 C4orf50Q6ZRC1 276 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 WDR49Q8IV35 697 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 ZNF507Q8TCN5 953 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 CYP2S1Q96SQ9 504 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 PKMYT1Q99640 499 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 C7orf25Q9BPX7 421 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 SNX25Q9H3E2 840 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 SLC39A2Q9NP94 309 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 HPS4Q9NQG7 708 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 C2orf42Q9NWW7 574 aa19.2■□□□□ 0.66
CIRBP-243ENST00000593128 TRAV19A0A0A6YYK7 116 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 GABRDO14764 452 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 TADA3O75528 432 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 NOL4O94818 638 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 F13A1P00488 732 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 BDNFP23560 247 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 ANXA13P27216 316 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 HOXC13P31276 330 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 GRSF1Q12849 480 aaKnown RBP eCLIP19.19■□□□□ 0.662e-8■■□□□ 12.5
CIRBP-243ENST00000593128 PUM1Q14671 1186 aaKnown RBP eCLIP19.19■□□□□ 0.66
CIRBP-243ENST00000593128 MAMSTRQ6ZN01 415 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-243ENST00000593128 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 TRAPPC11Q7Z392 1133 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-243ENST00000593128 GRAMD1CQ8IYS0 662 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 OR6B3Q8NGW1 331 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 RIN3Q8TB24 985 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 KBTBD7Q8WVZ9 684 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 CDH9Q9ULB4 789 aa19.19■□□□□ 0.66
CIRBP-243ENST00000593128 OTOGLQ3ZCN5 2332 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 OTOL1A6NHN0 477 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-243ENST00000593128 TGFB1I1O43294 461 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 USP17L7P0C7H9 530 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 TNNC1P63316 161 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 CCINQ13939 588 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 MTF1Q14872 753 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 CFAP221Q4G0U5 840 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 MDH1BQ5I0G3 518 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 CEP68Q76N32 757 aa19.18■□□□□ 0.66
CIRBP-243ENST00000593128 DPH6Q7L8W6 267 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms