RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CDH22Q9UJ99 828 aa15.9■□□□□ 0.14
DDX39A-221ENST00000593026 LGALS16A8MUM7 142 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 POU2F2P09086 479 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 HAPLN1P10915 354 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-221ENST00000593026 CYP2F1P24903 491 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 EPHB3P54753 998 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 MFAP3P55082 362 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 ZNF445P59923 1031 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 APTXQ7Z2E3 356 aaKnown RBP15.89■□□□□ 0.13
DDX39A-221ENST00000593026 ELMOD1Q8N336 334 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 SUSD6Q92537 303 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 KAT5Q92993 513 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 NECTIN4Q96NY8 510 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 COL25A1Q9BXS0 654 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-221ENST00000593026 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-221ENST00000593026 APEX2Q9UBZ4 518 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 XIRP2A4UGR9 3374 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 ATP8B3O60423 1300 aa15.89■□□□□ 0.13
DDX39A-221ENST00000593026 C2orf16Q68DN1 1984 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 BDNFP23560 247 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 MAGEA11P43364 429 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 RAD23BP54727 409 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 APBA1Q02410 837 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 VEPH1Q14D04 833 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 SMAD2Q15796 467 aaKnown RBP15.88■□□□□ 0.13
DDX39A-221ENST00000593026 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 VSTM1Q6UX27 236 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 ENOSF1Q7L5Y1 443 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 UBR7Q8N806 425 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 JAKMIP2Q96AA8 810 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 TMEM176AQ96HP8 235 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-221ENST00000593026 KREMEN1Q96MU8 473 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 MED10Q9BTT4 135 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 B3GNT5Q9BYG0 378 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 SIX2Q9NPC8 291 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 FAM49BQ9NUQ9 324 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 PCDHB4Q9Y5E5 795 aa15.88■□□□□ 0.13
DDX39A-221ENST00000593026 CLDN5O00501 218 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 IL9P15248 144 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 ATF6P18850 670 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 ACO1P21399 889 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 RPL10AP62906 217 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 UBXN1Q04323 297 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 KCNMA1Q12791 1236 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 IQCEQ6IPM2 695 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 TMEM270Q6UE05 265 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 GRASPQ7Z6J2 395 aaPredicted RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 FAM35AQ86V20 835 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 SCN4BQ8IWT1 228 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 C12orf29Q8N999 325 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 SLC4A11Q8NBS3 891 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 SLC2A14Q8TDB8 520 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 HEXIM2Q96MH2 286 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 LSM14BQ9BX40 385 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 ZNF518BQ9C0D4 1074 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 POMKQ9H5K3 350 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 WDR6Q9NNW5 1121 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 HCFC1R1Q9NWW0 138 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 CEP72Q9P209 647 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 ASB3Q9Y575 518 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 CLUHO75153 1309 aa15.87■□□□□ 0.13
DDX39A-221ENST00000593026 SPTBN5Q9NRC6 3674 aaKnown RBP15.87■□□□□ 0.13
DDX39A-221ENST00000593026 PTPRDP23468 1912 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 SERPINC1P01008 464 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 BMP1P13497 986 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 CCDC130P13994 396 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 PTPN2P17706 415 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 GRIK1P39086 918 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 GPR15P49685 360 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 DDR2Q16832 855 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 FUKQ8N0W3 1084 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 RBBP8NLQ8NC74 664 aaPredicted RBP15.86■□□□□ 0.13
DDX39A-221ENST00000593026 GPR152Q8TDT2 470 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 CYFIP2Q96F07 1278 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 CORO1BQ9BR76 489 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 DNMT3BQ9UBC3 853 aaKnown RBP15.86■□□□□ 0.13
DDX39A-221ENST00000593026 DNAJC12Q9UKB3 198 aa15.86■□□□□ 0.13
DDX39A-221ENST00000593026 TRIM66O15016 1216 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 AP1G2O75843 785 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 RHOP08100 348 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PAEPP09466 180 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 KRT5P13647 590 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 CD19P15391 556 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 RFX1P22670 979 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 ANXA13P27216 316 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 ADORA2BP29275 332 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 NTHL1P78549 312 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 SYCP1Q15431 976 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 TAF12Q16514 161 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 ARHGAP44Q17R89 818 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PABPC1LQ4VXU2 614 aaKnown RBP15.85■□□□□ 0.13
DDX39A-221ENST00000593026 KLHDC7AQ5VTJ3 777 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 SDHAF4Q5VUM1 108 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 PAQR9Q6ZVX9 377 aa15.85■□□□□ 0.13
DDX39A-221ENST00000593026 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms