RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 TAF12Q16514 161 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 PARM1Q6UWI2 310 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 C4orf50Q6ZRC1 276 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 ACOT1Q86TX2 421 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 GPIHBP1Q8IV16 184 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 B3GALNT2Q8NCR0 500 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 SHKBP1Q8TBC3 707 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 EDAQ92838 391 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 FGF14Q92915 247 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 ZSWIM3Q96MP5 696 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 MAGED2Q9UNF1 606 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-217ENST00000592905 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 ASB3Q9Y575 518 aa16.15■□□□□ 0.18
ERCC1-217ENST00000592905 OBSL1O75147 1896 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 NARSO43776 548 aaKnown RBP16.14■□□□□ 0.17
ERCC1-217ENST00000592905 GABRR2P28476 465 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 FMO5P49326 533 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 EPHA5P54756 1037 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 LRMPQ12912 555 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 HTR4Q13639 388 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 MAPRE1Q15691 268 aaKnown RBP16.14■□□□□ 0.17
ERCC1-217ENST00000592905 CFAP221Q4G0U5 840 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 STXBP5Q5T5C0 1151 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 GAREM2Q75VX8 874 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 ITIH5Q86UX2 942 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 TWNKQ96RR1 684 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 KXD1Q9BQD3 176 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 BCO2Q9BYV7 579 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 ZNF518BQ9C0D4 1074 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 NIF3L1Q9GZT8 377 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 ABCB6Q9NP58 842 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 C11orf16Q9NQ32 467 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
ERCC1-217ENST00000592905 SLC38A8A6NNN8 435 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 ANHXE9PGG2 379 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 HMGA1P17096 107 aaKnown RBP16.13■□□□□ 0.17
ERCC1-217ENST00000592905 GRIK1P39086 918 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 CACNA2D1P54289 1103 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 RPL10AP62906 217 aaKnown RBP16.13■□□□□ 0.17
ERCC1-217ENST00000592905 TDGQ13569 410 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 TPD52L1Q16890 204 aaPredicted RBP16.13■□□□□ 0.17
ERCC1-217ENST00000592905 WDR44Q5JSH3 913 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 TRIM59Q8IWR1 403 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 SLC44A3Q8N4M1 653 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 FUBP3Q96I24 572 aaKnown RBP eCLIP16.13■□□□□ 0.17
ERCC1-217ENST00000592905 ARID3AQ99856 593 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 MED10Q9BTT4 135 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 ATXN3LQ9H3M9 355 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 IL21Q9HBE4 155 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 TMEM30AQ9NV96 361 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 IGSF9Q9P2J2 1179 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 COQ4Q9Y3A0 265 aa16.13■□□□□ 0.17
ERCC1-217ENST00000592905 ZFP37Q9Y6Q3 630 aaPredicted RBP16.13■□□□□ 0.17
ERCC1-217ENST00000592905 ANAPC1Q9H1A4 1944 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
ERCC1-217ENST00000592905 GNA14O95837 355 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 MAGEA11P43364 429 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 CYP4F8P98187 520 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 ZNF394Q53GI3 561 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 HSP90AA4PQ58FG1 418 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 FAM78AQ5JUQ0 283 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 TANGO2Q6ICL3 276 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 TRIM67Q6ZTA4 783 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 PAQR9Q6ZVX9 377 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 IRF2BP1Q8IU81 584 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 C12orf29Q8N999 325 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 LEMD2Q8NC56 503 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 WHAMMQ8TF30 809 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 TNIP3Q96KP6 325 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
ERCC1-217ENST00000592905 PLA2G2FQ9BZM2 168 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 ELOVL4Q9GZR5 314 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 SLITRK6Q9H5Y7 841 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 CYP3A43Q9HB55 503 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 FAM49BQ9NUQ9 324 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 GDE1Q9NZC3 331 aa16.12■□□□□ 0.17
ERCC1-217ENST00000592905 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERCC1-217ENST00000592905 F8VP50 259 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 MICAL2O94851 1124 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 MBD3O95983 291 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 CSH1P0DML2 217 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 CSH2P0DML3 217 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 CCDC192P0DO97 292 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 CCDC130P13994 396 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 MARSP56192 900 aaKnown RBP16.11■□□□□ 0.17
ERCC1-217ENST00000592905 VSTM1Q6UX27 236 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
ERCC1-217ENST00000592905 UNC93AQ86WB7 457 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 C1QTNF1Q9BXJ1 281 aa16.11■□□□□ 0.17
ERCC1-217ENST00000592905 TMEM221A6NGB7 291 aa16.1■□□□□ 0.17
ERCC1-217ENST00000592905 M0R296 226 aa16.1■□□□□ 0.17
ERCC1-217ENST00000592905 NOL4O94818 638 aa16.1■□□□□ 0.17
ERCC1-217ENST00000592905 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
ERCC1-217ENST00000592905 ANXA13P27216 316 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms