RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 TXNDC11Q6PKC3 985 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 DPH6Q7L8W6 267 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 CMTM8Q8IZV2 173 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 RIN3Q8TB24 985 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 ELMO3Q96BJ8 720 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 SPATA32Q96LK8 384 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 RBM12Q9NTZ6 932 aaKnown RBP23.56■■□□□ 1.36
PTPN2-215ENST00000592776 FBXO4Q9UKT5 387 aa23.56■■□□□ 1.36
PTPN2-215ENST00000592776 LMNAP02545 664 aaKnown RBP23.55■■□□□ 1.36
PTPN2-215ENST00000592776 CSH1P0DML2 217 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 CSH2P0DML3 217 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 CMA1P23946 247 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 MAGEA9P43362 315 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 SNRPFP62306 86 aaKnown RBP23.55■■□□□ 1.36
PTPN2-215ENST00000592776 RPL10AP62906 217 aaKnown RBP23.55■■□□□ 1.36
PTPN2-215ENST00000592776 ARHGAP29Q52LW3 1261 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 C12orf56Q8IXR9 622 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 SPATA18Q8TC71 538 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 USP13Q92995 863 aaPredicted RBP23.55■■□□□ 1.36
PTPN2-215ENST00000592776 MYLPFQ96A32 169 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 ABCB6Q9NP58 842 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 OBP2AQ9NY56 170 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 HPSEQ9Y251 543 aa23.55■■□□□ 1.36
PTPN2-215ENST00000592776 EXOC3O60645 756 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 NOL4O94818 638 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 CHRNB1P11230 501 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 WARSP23381 471 aaKnown RBP23.54■■□□□ 1.36
PTPN2-215ENST00000592776 BDNFP23560 247 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 WEE1P30291 646 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 MYL6P60660 151 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 CHRDQ9H2X0 955 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 GKN1Q9NS71 199 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 EXOC1Q9NV70 894 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 CDH9Q9ULB4 789 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 CFAP54Q96N23 3096 aa23.54■■□□□ 1.36
PTPN2-215ENST00000592776 SPECC1L-ADORA2AF8WAN1 911 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 PRR29P0C7W0 189 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 KRT85P78386 507 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 GAS6Q14393 721 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 CFAP221Q4G0U5 840 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 TRIM68Q6AZZ1 485 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 CELF5Q8N6W0 485 aaKnown RBP23.53■■□□□ 1.36
PTPN2-215ENST00000592776 MRPS31Q92665 395 aaKnown RBP23.53■■□□□ 1.36
PTPN2-215ENST00000592776 SLC22A12Q96S37 553 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 CYP2S1Q96SQ9 504 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 MAGEC2Q9UBF1 373 aaPredicted RBP23.53■■□□□ 1.36
PTPN2-215ENST00000592776 DENND4CQ5VZ89 1909 aa23.53■■□□□ 1.36
PTPN2-215ENST00000592776 F5P12259 2224 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 OBSL1O75147 1896 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 CTHP32929 405 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 GNL1P36915 607 aaPredicted RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 AVPR1AP37288 418 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 NDUFA8P51970 172 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 CYP27A1Q02318 531 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 ZNF528Q3MIS6 628 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 WDR72Q3MJ13 1102 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 ZC3H14Q6PJT7 736 aaKnown RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 MON1AQ86VX9 555 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 DCLK2Q8N568 766 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 OR6B3Q8NGW1 331 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 SNX25Q9H3E2 840 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 SEMA4AQ9H3S1 761 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 DPEP3Q9H4B8 488 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 C8orf33Q9H7E9 229 aaPredicted RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 TRPC7Q9HCX4 862 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 PRMT8Q9NR22 394 aaPredicted RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 DMAC2Q9NW81 257 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 CGNQ9P2M7 1197 aaKnown RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 NXF1Q9UBU9 619 aaKnown RBP23.52■■□□□ 1.36
PTPN2-215ENST00000592776 FANCMQ8IYD8 2048 aa23.52■■□□□ 1.36
PTPN2-215ENST00000592776 LRRIQ3A6PVS8 624 aaPredicted RBP23.51■■□□□ 1.35
PTPN2-215ENST00000592776 TRPC3Q13507 836 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 PON2Q15165 354 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 MDH1BQ5I0G3 518 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 TDRD10Q5VZ19 366 aaKnown RBP23.51■■□□□ 1.35
PTPN2-215ENST00000592776 PCED1BQ96HM7 432 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 FUBP3Q96I24 572 aaKnown RBP eCLIP23.51■■□□□ 1.35
PTPN2-215ENST00000592776 MYRFLQ96LU7 910 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 XYLT2Q9H1B5 865 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 KCTD10Q9H3F6 313 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 GDPD2Q9HCC8 539 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 HPS4Q9NQG7 708 aa23.51■■□□□ 1.35
PTPN2-215ENST00000592776 KIF26AQ9ULI4 1882 aaPredicted RBP23.51■■□□□ 1.35
PTPN2-215ENST00000592776 OTOL1A6NHN0 477 aaPredicted RBP23.5■■□□□ 1.35
PTPN2-215ENST00000592776 PHACTR2O75167 634 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 RPN1P04843 607 aaKnown RBP23.5■■□□□ 1.35
PTPN2-215ENST00000592776 HOXC13P31276 330 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 GRIK1P39086 918 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 MAGEA11P43364 429 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 SYKP43405 635 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 CACNA2D1P54289 1103 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 MLLT6P55198 1093 aaPredicted RBP23.5■■□□□ 1.35
PTPN2-215ENST00000592776 CDH8P55286 799 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 USP46P62068 366 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 TNNC1P63316 161 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 DLG4P78352 724 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 SATB1Q01826 763 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 C4orf50Q6ZRC1 276 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 Q6ZS52 159 aa23.5■■□□□ 1.35
PTPN2-215ENST00000592776 SUMF1Q8NBK3 374 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms