RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 SATB1Q01826 763 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 KCNA1Q09470 495 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 GRSF1Q12849 480 aaKnown RBP eCLIP10.88□□□□□ -0.67
VMP1-214ENST00000592106 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
VMP1-214ENST00000592106 PON2Q15165 354 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 MAPRE1Q15691 268 aaKnown RBP10.88□□□□□ -0.67
VMP1-214ENST00000592106 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 DPH6Q7L8W6 267 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.88□□□□□ -0.67
VMP1-214ENST00000592106 LONP2Q86WA8 852 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 MAB21L3Q8N8X9 362 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 ZFYVE19Q96K21 471 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 CBWD1Q9BRT8 395 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 MTMR12Q9C0I1 747 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 IKZF4Q9H2S9 585 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 PCIF1Q9H4Z3 704 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 IL21Q9HBE4 155 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 TDP1Q9NUW8 608 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 EHD2Q9NZN4 543 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 CACNA1GO43497 2377 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 SPTLC2O15270 562 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 FOXD2O60548 495 aaPredicted RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 LRP3O75074 770 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 ATG13O75143 517 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 YEATS4O95619 227 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 F11P03951 625 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 HSP90AA1P07900 732 aaKnown RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 TDGF1P13385 188 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 RUNX3Q13761 415 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 ZNF268Q14587 947 aaPredicted RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 PDGFRLQ15198 375 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 DUOXA2Q1HG44 320 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 RSPO4Q2I0M5 234 aaPredicted RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 CEP68Q76N32 757 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 HS2ST1Q7LGA3 356 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 LRRTM3Q86VH5 581 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 WDR49Q8IV35 697 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 CPA6Q8N4T0 437 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 IQUBQ8NA54 791 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 TTC8Q8TAM2 541 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 TRMT2BQ96GJ1 504 aaKnown RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 FNBP1Q96RU3 617 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 SLC46A2Q9BY10 475 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 GKN1Q9NS71 199 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 RBM12Q9NTZ6 932 aaKnown RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
VMP1-214ENST00000592106 ZFHX2Q9C0A1 2572 aaPredicted RBP10.87□□□□□ -0.67
VMP1-214ENST00000592106 A0A087X0B3 334 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 TRAV19A0A0A6YYK7 116 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CHURC1-FNTBB4DL54 471 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CUTAO60888 179 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 NOL4O94818 638 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CKMP06732 381 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 RETP07949 1114 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 USP17L7P0C7H9 530 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 HMGA1P17096 107 aaKnown RBP10.86□□□□□ -0.67
VMP1-214ENST00000592106 ACAT1P24752 427 aaKnown RBP10.86□□□□□ -0.67
VMP1-214ENST00000592106 ANXA13P27216 316 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 HOXA6P31267 233 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 IFNAR2P48551 515 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 FNTBP49356 437 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 GPR15P49685 360 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CDR1P51861 262 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 SNRPFP62306 86 aaKnown RBP10.86□□□□□ -0.67
VMP1-214ENST00000592106 FAM160A1Q05DH4 1040 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 TNK2Q07912 1038 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CCINQ13939 588 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 KCNB1Q14721 858 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 DDR2Q16832 855 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 FBXO43Q4G163 708 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 FAM26FQ5R3K3 315 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 TXNDC11Q6PKC3 985 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 VSTM1Q6UX27 236 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 Q6ZS52 159 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 WDR5BQ86VZ2 330 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 SCN4BQ8IWT1 228 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CCDC26Q8TAB7 109 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 DHX58Q96C10 678 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 HPDLQ96IR7 371 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 CEP295NLQ96MC4 621 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 RTKNQ9BST9 563 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
VMP1-214ENST00000592106 TMLHEQ9NVH6 421 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 INTS13Q9NVM9 706 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 HSPBP1Q9NZL4 362 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 MAGEC2Q9UBF1 373 aaPredicted RBP10.86□□□□□ -0.67
VMP1-214ENST00000592106 GTF3C4Q9UKN8 822 aa10.86□□□□□ -0.67
VMP1-214ENST00000592106 PCDHGA10Q9Y5H3 936 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms