RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 C2orf15Q8WU43 125 aaKnown RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 SMARCD2Q92925 531 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 RSPRY1Q96DX4 576 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 DHTKD1Q96HY7 919 aaPredicted RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 LPIN3Q9BQK8 851 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 PI4K2AQ9BTU6 479 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 MKNK1Q9BUB5 465 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 DDX23Q9BUQ8 820 aaKnown RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 ZFP14Q9HCL3 533 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 HSFX1Q9UBD0 423 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 GTF3C4Q9UKN8 822 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 SIT1Q9Y3P8 196 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 MTF2Q9Y483 593 aaPredicted RBP14.89□□□□□ -0.03
CLIP3-205ENST00000592017 ASB3Q9Y575 518 aa14.89□□□□□ -0.03
CLIP3-205ENST00000592017 SHISA7A6NL88 538 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 IKBKBO14920 756 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 ATP2C2O75185 946 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 STAU1O95793 577 aaKnown RBP14.88□□□□□ -0.03
CLIP3-205ENST00000592017 HAPLN1P10915 354 aaPredicted RBP14.88□□□□□ -0.03
CLIP3-205ENST00000592017 GLULP15104 373 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 ATF6P18850 670 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 BMP6P22004 513 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 LMO2P25791 158 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 RAP1GAPP47736 663 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 TUFMP49411 452 aaKnown RBP14.88□□□□□ -0.03
CLIP3-205ENST00000592017 PFKPQ01813 784 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 PRKCQQ04759 706 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 GRM2Q14416 872 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 NFE2Q16621 373 aaPredicted RBP14.88□□□□□ -0.03
CLIP3-205ENST00000592017 STXBP5Q5T5C0 1151 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 CLEC17AQ6ZS10 378 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 SPATA2LQ8IUW3 424 aaPredicted RBP14.88□□□□□ -0.03
CLIP3-205ENST00000592017 GPIHBP1Q8IV16 184 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 GIPC2Q8TF65 315 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 PSMG2Q969U7 264 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 SHDQ96IW2 340 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 IMPG2Q9BZV3 1241 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 CLSTN2Q9H4D0 955 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 TRPV4Q9HBA0 871 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 CDH9Q9ULB4 789 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 USP34Q70CQ2 3546 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 MYO15AQ9UKN7 3530 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 NCANO14594 1321 aa14.88□□□□□ -0.03
CLIP3-205ENST00000592017 DMDP11532 3685 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 MYBPHLA2RUH7 354 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 SLC16A3O15427 465 aaKnown RBP14.87□□□□□ -0.03
CLIP3-205ENST00000592017 TACC1O75410 805 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 P4HA1P13674 534 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 CD72P21854 359 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 GNL1P36915 607 aaPredicted RBP14.87□□□□□ -0.03
CLIP3-205ENST00000592017 GPR15P49685 360 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 MXI1P50539 228 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 CDH8P55286 799 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 STX17P56962 302 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 CYP27A1Q02318 531 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 PAK1Q13153 545 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 ANGPT1Q15389 498 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 TAF12Q16514 161 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 SGSM1Q2NKQ1 1148 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 SDHAF4Q5VUM1 108 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 VITQ6UXI7 678 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 LIMS2Q7Z4I7 341 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 ITIH5Q86UX2 942 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 TAS1R2Q8TE23 839 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 MYLPFQ96A32 169 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 PKMYT1Q99640 499 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 TRMT61BQ9BVS5 477 aaKnown RBP14.87□□□□□ -0.03
CLIP3-205ENST00000592017 NUP62CLQ9H1M0 184 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 DPEP3Q9H4B8 488 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 IL21Q9HBE4 155 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 TMEM8AQ9HCN3 771 aa14.87□□□□□ -0.03
CLIP3-205ENST00000592017 KANSL1LA0AUZ9 987 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 BICDL2A1A5D9 508 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 A8MXQ7 604 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 PROB1E7EW31 1015 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 GOLGA6L22H0YM25 854 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 CYP2F1P24903 491 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 GABRR2P28476 465 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 ENPEPQ07075 957 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 CCDC40Q4G0X9 1142 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 MDH1BQ5I0G3 518 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 C4orf50Q6ZRC1 276 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 ZC3H3Q8IXZ2 948 aaKnown RBP14.86□□□□□ -0.03
CLIP3-205ENST00000592017 TRIML1Q8N9V2 468 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 LRRC3BQ96PB8 259 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 GPR88Q9GZN0 384 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 SDCBP2Q9H190 292 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 ATXN3LQ9H3M9 355 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 VRTNQ9H8Y1 702 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 CRTAC1Q9NQ79 661 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 LMBRD1Q9NUN5 540 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms