RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CDCA2Q69YH5 1023 aaPredicted RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 MCTP2Q6DN12 878 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 SWSAP1Q6NVH7 229 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 DDX53Q86TM3 631 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 RTN4RL1Q86UN2 441 aaPredicted RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 CILP2Q8IUL8 1156 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 PPIL6Q8IXY8 311 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 PLD6Q8N2A8 252 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 CCDC148Q8NFR7 591 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 APBB2Q92870 758 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 GJA10Q969M2 543 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 TGS1Q96RS0 853 aaKnown RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 FAM49AQ9H0Q0 323 aaPredicted RBP8.43□□□□□ -1.06
VMP1-213ENST00000591877 IFT22Q9H7X7 185 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 ZNF302Q9NR11 478 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 THEGQ9P2T0 379 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 MTUS1Q9ULD2 1270 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 TPCN1Q9ULQ1 816 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 INSL6Q9Y581 213 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 PCDHA2Q9Y5H9 948 aa8.43□□□□□ -1.06
VMP1-213ENST00000591877 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 LRRC10BA6NIK2 292 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 PRRG2O14669 202 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 MEFVO15553 781 aaPredicted RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 HBP1O60381 514 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 DEXIO95424 95 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 CTDNEP1O95476 244 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 THBDP07204 575 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 FAM87AP0C7U9 286 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 SRFP11831 508 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 CD52P31358 61 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 SLC26A2P50443 739 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 NLRP5P59047 1200 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 GUCY1A3Q02108 690 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TFF2Q03403 129 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 NFE2Q16621 373 aaPredicted RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 DPY19L1Q2PZI1 675 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 MIS18BP1Q6P0N0 1132 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TSHZ1Q6ZSZ6 1077 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 RSPH3Q86UC2 560 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 KIAA0319LQ8IZA0 1049 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 MFSD4AQ8N468 514 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TBCKQ8TEA7 893 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 ATP8B4Q8TF62 1192 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 FRS2Q8WU20 508 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 ATXN2LQ8WWM7 1075 aaKnown RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 USP7Q93009 1102 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 IL17RAQ96F46 866 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 ASB2Q96Q27 587 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 CELF4Q9BZC1 486 aaKnown RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 ASPSCR1Q9BZE9 553 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 GJB4Q9NTQ9 266 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TBC1D22BQ9NU19 505 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TRAF6Q9Y4K3 522 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 TRPV2Q9Y5S1 764 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 CAPN6Q9Y6Q1 641 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 NCANO14594 1321 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 FNDC1Q4ZHG4 1894 aaPredicted RBP8.42□□□□□ -1.06
VMP1-213ENST00000591877 XIRP2A4UGR9 3374 aa8.42□□□□□ -1.06
VMP1-213ENST00000591877 NCOR1O75376 2440 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 MYO7AQ13402 2215 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 COL1A2P08123 1366 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 IGSF9BQ9UPX0 1349 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 KDM3AQ9Y4C1 1321 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 TRBV23OR9-2A0A075B6M9 112 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 CPLX1O14810 134 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 PFKFB2O60825 505 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 LEFTY1O75610 366 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 TDP2O95551 362 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 C22orf31O95567 290 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 CD3EP07766 207 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 ENDOUP21128 410 aaKnown RBP8.41□□□□□ -1.06
VMP1-213ENST00000591877 LTBRP36941 435 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 SCNN1BP51168 640 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 AK2P54819 239 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 UGCGQ16739 394 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 CLEC16AQ2KHT3 1053 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 FAM160B1Q5W0V3 765 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 EEF1DP3Q658K8 133 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 B3GNT9Q6UX72 402 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 BLIDQ8IZY5 108 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 FAM181AQ8N9Y4 354 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 SLC5A5Q92911 643 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 TNPO1Q92973 898 aaKnown RBP8.41□□□□□ -1.06
VMP1-213ENST00000591877 ZNF689Q96CS4 500 aaPredicted RBP8.41□□□□□ -1.06
VMP1-213ENST00000591877 MBOAT7Q96N66 472 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 YME1L1Q96TA2 773 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 MCMBPQ9BTE3 642 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 PHF20Q9BVI0 1012 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 TRIT1Q9H3H1 467 aaKnown RBP8.41□□□□□ -1.06
VMP1-213ENST00000591877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.41□□□□□ -1.06
VMP1-213ENST00000591877 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 GABBR1Q9UBS5 961 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms