RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 AVPP01185 164 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ITGB3P05106 788 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ITGB1P05556 798 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 LINC00271P0C7V0 271 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 NFKB1P19838 968 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 SOX18P35713 384 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 PSMC2P35998 433 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 BMPR1AP36894 532 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MXI1P50539 228 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 CLCNKBP51801 687 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 VAMP7P51809 220 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ERVK-21P61565 698 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 FKBP3Q00688 224 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MYL7Q01449 175 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MYL5Q02045 173 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 GPM6BQ13491 265 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 UBAP2LQ14157 1087 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 SURF1Q15526 300 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 NFIL3Q16649 462 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 PLPP4Q5VZY2 271 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 FUT10Q6P4F1 479 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 SCARA5Q6ZMJ2 495 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 USP37Q86T82 979 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 COLGALT2Q8IYK4 626 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 OR5B17Q8NGF7 314 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MRFAP1L1Q96HT8 127 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 B3GALT6Q96L58 329 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 FBXL18Q96ME1 805 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 UROC1Q96N76 676 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 POP1Q99575 1024 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 NAT10Q9H0A0 1025 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 TTYH1Q9H313 450 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ASB7Q9H672 318 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 DMAC2Q9NW81 257 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MARCH5Q9NX47 278 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 DPP3Q9NY33 737 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 UBP1Q9NZI7 540 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ARMCX3Q9UH62 379 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 HCN2Q9UL51 889 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 STRIP2Q9ULQ0 834 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 DERAQ9Y315 318 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
VPS4B-205ENST00000591383 REV3LO60673 3130 aa6.89□□□□□ -1.31
VPS4B-205ENST00000591383 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 C2CD2LO14523 706 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 GRM6O15303 877 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 LPXNO60711 386 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 TADA2AO75478 443 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 B3GAT3O94766 335 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 URODP06132 367 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 GALTP07902 379 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 FOSL2P15408 326 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ITPKAP23677 461 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 GCLMP48507 274 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 GLUD2P49448 558 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 DLG4P78352 724 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 PLAURQ03405 335 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 KRT17Q04695 432 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 TRPC3Q13507 836 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 CAMK2GQ13555 558 aaPredicted RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 MYBPC2Q14324 1141 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 NAB2Q15742 525 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 SPRED3Q2MJR0 410 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ZNF699Q32M78 642 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 SV2CQ496J9 727 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 XKR4Q5GH76 650 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 SPATA1Q5VX52 437 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 TDRD10Q5VZ19 366 aaKnown RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ALKAL1Q6UXT8 129 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 FAM114A1Q8IWE2 563 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 ZC3H3Q8IXZ2 948 aaKnown RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 DEFB123Q8N688 67 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 PLEKHO2Q8TD55 490 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 CACTINQ8WUQ7 758 aaKnown RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 AUTS2Q8WXX7 1259 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 IGSF21Q96ID5 467 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 HERC2P3Q9BVR0 1158 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 COLEC11Q9BWP8 271 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 PLVAPQ9BX97 442 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
VPS4B-205ENST00000591383 CEP44Q9C0F1 390 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
VPS4B-205ENST00000591383 INTS13Q9NVM9 706 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms