RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CBWD2Q8IUF1 395 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 STKLD1Q8NE28 680 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 GLIS3Q8NEA6 775 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 TRMT2BQ96GJ1 504 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 HPDLQ96IR7 371 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 TRIM9Q9C026 710 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 DLL3Q9NYJ7 618 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 HSPBP1Q9NZL4 362 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 USP18Q9UMW8 372 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 CCL26Q9Y258 94 aa19.24■□□□□ 0.67
PRKCSH-211ENST00000590098 MED19A0JLT2 244 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 CHURC1-FNTBB4DL54 471 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 GABRDO14764 452 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 CUTAO60888 179 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 NOL4O94818 638 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 PAPSS2O95340 614 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 YEATS4O95619 227 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 TGM1P22735 817 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 FNTBP49356 437 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 AMPD2Q01433 879 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 LMNB2Q03252 620 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 RUNX3Q13761 415 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 CCINQ13939 588 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 E2F4Q16254 413 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 LPAL2Q16609 132 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 CFAP221Q4G0U5 840 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 LAIR1Q6GTX8 287 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 C4orf50Q6ZRC1 276 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 SCN4BQ8IWT1 228 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 OR5B17Q8NGF7 314 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 FUBP3Q96I24 572 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 PKMYT1Q99640 499 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 FAM83CQ9BQN1 747 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 EBF3Q9H4W6 596 aa19.23■□□□□ 0.67
PRKCSH-211ENST00000590098 PRR5-ARHGAP8B1AHC4 643 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 CNR2P34972 360 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 ARHGAP8P85298 464 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 GRSF1Q12849 480 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 SIM2Q14190 667 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 FAM26FQ5R3K3 315 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 HEATR6Q6AI08 1181 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 LONP2Q86WA8 852 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 WDR49Q8IV35 697 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 ZNF507Q8TCN5 953 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 C2orf42Q9NWW7 574 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 PTPRJQ12913 1337 aa19.22■□□□□ 0.67
PRKCSH-211ENST00000590098 ATG2BQ96BY7 2078 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 TRAV19A0A0A6YYK7 116 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 K7ESF4 209 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 HOXD13P35453 343 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 DMWDQ09019 674 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 ZNF268Q14587 947 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 PDGFRLQ15198 375 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 TRIM68Q6AZZ1 485 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 RALGAPA1Q6GYQ0 2036 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 CNNM4Q6P4Q7 775 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 FAM171BQ6P995 826 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 RDH13Q8NBN7 331 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 TTC16Q8NEE8 873 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 EXOC4Q96A65 974 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 FNBP1Q96RU3 617 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 MMS19Q96T76 1030 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 C7orf25Q9BPX7 421 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 SYT15Q9BQS2 421 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 MAGEF1Q9HAY2 307 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 HPS4Q9NQG7 708 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
PRKCSH-211ENST00000590098 HRO43593 1189 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 HCRTO43612 131 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 ATP2C2O75185 946 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 CKMP06732 381 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 RETP07949 1114 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 USP17L7P0C7H9 530 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 DLATP10515 647 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 PDIA4P13667 645 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 TNNI1P19237 187 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 MAGEA11P43364 429 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 SNRNP35Q16560 246 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 SHC4Q6S5L8 630 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 EPM2AIP1Q7L775 607 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 PARD6AQ9NPB6 346 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 CDV3Q9UKY7 258 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-211ENST00000590098 GREB1Q4ZG55 1949 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 ANAPC1Q9H1A4 1944 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 POLR2DO15514 142 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 ATG13O75143 517 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 TADA3O75528 432 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 HSP90AA1P07900 732 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 PDGFRBP09619 1106 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms