RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DNMT3BQ9UBC3 853 aaKnown RBP22.69■■□□□ 1.22
ATG4D-212ENST00000590096 HMGXB4Q9UGU5 601 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ASB3Q9Y575 518 aa22.69■■□□□ 1.22
ATG4D-212ENST00000590096 ATP8B3O60423 1300 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 SP100P23497 879 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-212ENST00000590096 SSTR3P32745 418 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-212ENST00000590096 RPL10AP62906 217 aaKnown RBP22.68■■□□□ 1.22
ATG4D-212ENST00000590096 ORC1Q13415 861 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 TAF12Q16514 161 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 LMO3Q8TAP4 145 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 ARID3AQ99856 593 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 LPIN3Q9BQK8 851 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 CRACR2AQ9BSW2 395 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 CISHQ9NSE2 258 aa22.68■■□□□ 1.22
ATG4D-212ENST00000590096 GTPBP10A4D1E9 387 aaKnown RBP22.67■■□□□ 1.22
ATG4D-212ENST00000590096 SMTNL1A8MU46 457 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 RHOP08100 348 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 CDK11BP21127 795 aaKnown RBP22.67■■□□□ 1.22
ATG4D-212ENST00000590096 BDNFP23560 247 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 FSHRP23945 695 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 MAGEA11P43364 429 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 ZNF165P49910 485 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 NTHL1P78549 312 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 EXOC3L4Q17RC7 722 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 VSTM1Q6UX27 236 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 OTOP3Q7RTS5 596 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 SCN4BQ8IWT1 228 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 CRYBG2Q8N1P7 616 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 TDRD5Q8NAT2 981 aaKnown RBP22.67■■□□□ 1.22
ATG4D-212ENST00000590096 ACSF2Q96CM8 615 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-212ENST00000590096 NECAB3Q96P71 396 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-212ENST00000590096 MED10Q9BTT4 135 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 ELOVL4Q9GZR5 314 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 ASAH2Q9NR71 780 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 USTQ9Y2C2 406 aa22.67■■□□□ 1.22
ATG4D-212ENST00000590096 DOCK6Q96HP0 2047 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 ATF6P18850 670 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 GBP2P32456 591 aaPredicted RBP22.66■■□□□ 1.22
ATG4D-212ENST00000590096 MIIPQ5JXC2 388 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 CYP4A22Q5TCH4 519 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 PDZD4Q76G19 769 aaPredicted RBP22.66■■□□□ 1.22
ATG4D-212ENST00000590096 GET4Q7L5D6 327 aaPredicted RBP22.66■■□□□ 1.22
ATG4D-212ENST00000590096 LEMD2Q8NC56 503 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 GIPC2Q8TF65 315 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 PSMG2Q969U7 264 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 TWNKQ96RR1 684 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 B3GNT5Q9BYG0 378 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 TAB2Q9NYJ8 693 aa22.66■■□□□ 1.22
ATG4D-212ENST00000590096 PTPRDP23468 1912 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 BECN2A8MW95 431 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 TRIM66O15016 1216 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 ANXA13P27216 316 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 GRIK1P39086 918 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 GCNT1Q02742 428 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 NCAPHQ15003 741 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 KRT31Q15323 416 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 DDR2Q16832 855 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 ZNF394Q53GI3 561 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 DNAJB7Q7Z6W7 309 aaPredicted RBP22.65■■□□□ 1.22
ATG4D-212ENST00000590096 WHAMMQ8TF30 809 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 AVENQ9NQS1 362 aaPredicted RBP22.65■■□□□ 1.22
ATG4D-212ENST00000590096 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.65■■□□□ 1.22
ATG4D-212ENST00000590096 MRPS23Q9Y3D9 190 aaKnown RBP22.65■■□□□ 1.22
ATG4D-212ENST00000590096 C5orf42Q9H799 3197 aa22.65■■□□□ 1.22
ATG4D-212ENST00000590096 C19orf67A6NJJ6 358 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 C2CD4DB7Z1M9 353 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 LOC730098B7Z3J9 87 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 CLDN5O00501 218 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 ZNF197O14709 1029 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 MYL4P12829 197 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 GPR15P49685 360 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 TRIM65Q6PJ69 517 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 RRAGAQ7L523 313 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 FAM35AQ86V20 835 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 ARHGEF19Q8IW93 802 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 DHX40Q8IX18 779 aaKnown RBP22.64■■□□□ 1.21
ATG4D-212ENST00000590096 HS6ST3Q8IZP7 471 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 GJD3Q8N144 294 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 GPR152Q8TDT2 470 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 SMARCD1Q96GM5 515 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 FAM81BQ96LP2 452 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 ZNF518BQ9C0D4 1074 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 VPS16Q9H269 839 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 FAM49BQ9NUQ9 324 aa22.64■■□□□ 1.21
ATG4D-212ENST00000590096 CAVIN2O95810 425 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 CSH1P0DML2 217 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 CSH2P0DML3 217 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 CCDC130P13994 396 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 SLC9A1P19634 815 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 SDHAF4Q5VUM1 108 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 PLCD3Q8N3E9 789 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 C12orf29Q8N999 325 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 SLC2A14Q8TDB8 520 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 TMEM176AQ96HP8 235 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 HEXIM2Q96MH2 286 aaKnown RBP22.63■■□□□ 1.21
ATG4D-212ENST00000590096 UBE2TQ9NPD8 197 aaPredicted RBP22.63■■□□□ 1.21
ATG4D-212ENST00000590096 PCDHB4Q9Y5E5 795 aa22.63■■□□□ 1.21
ATG4D-212ENST00000590096 NOTCH4Q99466 2003 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 TNFRSF10AO00220 468 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 FGF19O95750 216 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms