RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CCL23P55773 120 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 CREMQ03060 361 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 DRAP1Q14919 205 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 IFI16Q16666 785 aaKnown RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 WDR72Q3MJ13 1102 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 ZBTB41Q5SVQ8 909 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 C1orf220Q5T0J3 134 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 ZNF468Q5VIY5 522 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 C9orf57Q5W0N0 161 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 GPR65Q8IYL9 337 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 FAM71AQ8IYT1 594 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 CMTR2Q8IYT2 770 aaKnown RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 THEM5Q8N1Q8 247 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 BEND7Q8N7W2 519 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 C1orf127Q8N9H9 656 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 RNF169Q8NCN4 708 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 LMO3Q8TAP4 145 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 SHC3Q92529 594 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 DPF3Q92784 378 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 NOX5Q96PH1 765 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 SLC9A7Q96T83 725 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 GAD1Q99259 594 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 POP1Q99575 1024 aaKnown RBP7.81□□□□□ -1.16
SMAD4-210ENST00000590061 TSGA10Q9BZW7 698 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 ZNF518BQ9C0D4 1074 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 GANQ9H2C0 597 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 PDCL3Q9H2J4 239 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 IKZF4Q9H2S9 585 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 SNX25Q9H3E2 840 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 ZNF232Q9UNY5 417 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 CNTN6Q9UQ52 1028 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 RALGAPA2Q2PPJ7 1873 aa7.81□□□□□ -1.16
SMAD4-210ENST00000590061 SYN3O14994 580 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 AP5Z1O43299 807 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 LSM8O95777 96 aaKnown RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 CCDC175P0C221 793 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 GZMAP12544 262 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 KRT5P13647 590 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 DESP17661 470 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 LAG3P18627 525 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TYMPP19971 482 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TNFAIP3P21580 790 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 POLR2BP30876 1174 aaKnown RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 MLH1P40692 756 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 USP8P40818 1118 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 DGKGP49619 791 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 SEC13P55735 322 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 JAM2P57087 298 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 LILRA4P59901 499 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 MYL6P60660 151 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 GRIN2CQ14957 1233 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 SEZ6Q53EL9 994 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TDRD12Q587J7 1177 aaKnown RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 DSTYKQ6XUX3 929 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 LINC00114Q6XXX2 140 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 LRRC69Q6ZNQ3 347 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 DEFB128Q7Z7B8 93 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 CDR2LQ86X02 465 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 EFCAB13Q8IY85 973 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 CEP120Q8N960 986 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TC2NQ8N9U0 490 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 OR5B17Q8NGF7 314 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 PLEKHO2Q8TD55 490 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 HELQQ8TDG4 1101 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TOP1MTQ969P6 601 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 C2orf49Q9BVC5 232 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 BCO2Q9BYV7 579 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 WNT8AQ9H1J5 351 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 NLRC4Q9NPP4 1024 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 INTUQ9ULD6 942 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 MAFFQ9ULX9 164 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 BARX2Q9UMQ3 279 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 HES2Q9Y543 173 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 INSL6Q9Y581 213 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 PCDHB4Q9Y5E5 795 aa7.8□□□□□ -1.16
SMAD4-210ENST00000590061 TNRC18O15417 2968 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-210ENST00000590061 SF3B1O75533 1304 aaKnown RBP eCLIP7.79□□□□□ -1.163e-6■■■■■ 137.9
SMAD4-210ENST00000590061 TANC1Q9C0D5 1861 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 LRRC53A6NM62 1247 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 HMGB1P1B2RPK0 211 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 EIF3CLB5ME19 914 aaKnown RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 H7C4K7 107 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 PODXLO00592 558 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 MGEA5O60502 916 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 TADA2AO75478 443 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 B3GAT3O94766 335 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 NOL4O94818 638 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 VNN1O95497 513 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 MYBL1P10243 752 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 VDRP11473 427 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ADH6P28332 368 aa7.79□□□□□ -1.16
SMAD4-210ENST00000590061 GNL1P36915 607 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 FXR1P51114 621 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 ADKP55263 362 aaKnown RBP7.79□□□□□ -1.16
SMAD4-210ENST00000590061 KRT17Q04695 432 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms