RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 FUBP3Q96I24 572 aaKnown RBP eCLIP16.1■□□□□ 0.17
NFIX-212ENST00000590027 TASP1Q9H6P5 420 aa16.1■□□□□ 0.17
NFIX-212ENST00000590027 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
NFIX-212ENST00000590027 MTF2Q9Y483 593 aaPredicted RBP16.1■□□□□ 0.17
NFIX-212ENST00000590027 MYO15AQ9UKN7 3530 aa16.1■□□□□ 0.17
NFIX-212ENST00000590027 F5P12259 2224 aa16.1■□□□□ 0.17
NFIX-212ENST00000590027 ANAPC1Q9H1A4 1944 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 ARNTLO00327 626 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 ZNF263O14978 683 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
NFIX-212ENST00000590027 TACC1O75410 805 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 KIF20AO95235 890 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 F11P03951 625 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 DLG4P78352 724 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 FCHO2Q0JRZ9 810 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 KCNB1Q14721 858 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 ZNF699Q32M78 642 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 SCARA5Q6ZMJ2 495 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 C4orf50Q6ZRC1 276 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 YAF2Q8IY57 180 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 OR6B3Q8NGW1 331 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 TMEM174Q8WUU8 243 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
NFIX-212ENST00000590027 ELMO3Q96BJ8 720 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
NFIX-212ENST00000590027 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
NFIX-212ENST00000590027 TRAF3IP3Q9Y228 551 aa16.09■□□□□ 0.17
NFIX-212ENST00000590027 HELZP42694 1942 aaKnown RBP16.08■□□□□ 0.16
NFIX-212ENST00000590027 DPYSL4O14531 572 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 NOL4O94818 638 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 VNN1O95497 513 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 C4BPAP04003 597 aaKnown RBP16.08■□□□□ 0.16
NFIX-212ENST00000590027 NR2F2P24468 414 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 ATICP31939 592 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 NBL1P41271 181 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 MAGEA11P43364 429 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 AP3M2P53677 418 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 CLDN10P78369 228 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 PNOCQ13519 176 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 NCOA4Q13772 614 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.16
NFIX-212ENST00000590027 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
NFIX-212ENST00000590027 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 LRRC3BQ96PB8 259 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 SLC46A2Q9BY10 475 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 DPEP3Q9H4B8 488 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 TRPV5Q9NQA5 729 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
NFIX-212ENST00000590027 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 VPS13AQ96RL7 3174 aa16.08■□□□□ 0.16
NFIX-212ENST00000590027 USP34Q70CQ2 3546 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 CACNA1IQ9P0X4 2223 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 FAM170BA6NMN3 283 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 CHADO15335 359 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 BDNFP23560 247 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 WEE1P30291 646 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 MAPRE1Q15691 268 aaKnown RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 NFIL3Q16649 462 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 ZACNQ401N2 412 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 ZNF852Q6ZMS4 543 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 CMTM8Q8IZV2 173 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 TRMT2BQ96GJ1 504 aaKnown RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 ZFYVE19Q96K21 471 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 BCO2Q9BYV7 579 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 OSBPL6Q9BZF3 934 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 OBP2AQ9NY56 170 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 NDRG2Q9UN36 371 aaKnown RBP16.07■□□□□ 0.16
NFIX-212ENST00000590027 FRMD4BQ9Y2L6 1034 aa16.07■□□□□ 0.16
NFIX-212ENST00000590027 FANCMQ8IYD8 2048 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 TRIM49P0CI25 452 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 TRIM49CP0CI26 452 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 DDX6P26196 483 aaKnown RBP eCLIP16.06■□□□□ 0.16
NFIX-212ENST00000590027 GNL1P36915 607 aaPredicted RBP16.06■□□□□ 0.16
NFIX-212ENST00000590027 ZCWPW2Q504Y3 356 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 TXNDC8Q6A555 127 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 VSTM1Q6UX27 236 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 C1orf210Q8IVY1 113 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 BPIFB1Q8TDL5 484 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 CSGALNACT1Q8TDX6 532 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 MYRFLQ96LU7 910 aa16.06■□□□□ 0.16
NFIX-212ENST00000590027 SDCBP2Q9H190 292 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms