RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZPBP2Q6X784 338 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 CPA6Q8N4T0 437 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 OLIG1Q8TAK6 271 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 OSCP1Q8WVF1 389 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 PI4K2AQ9BTU6 479 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 TRPC7Q9HCX4 862 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 TCHHQ07283 1943 aa13.81□□□□□ -0.2
PRKCSH-210ENST00000589990 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 APC2O95996 2303 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 ADRB2P07550 413 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 PLS3P13797 630 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 ZXDBP98169 803 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 AMPD2Q01433 879 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 USP4Q13107 963 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 SEMA3BQ13214 749 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 COL28A1Q2UY09 1125 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 SCARA3Q6AZY7 606 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 PDZD3Q86UT5 571 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 IGSF22Q8N9C0 903 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 PLIN2Q99541 437 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 DNM3Q9UQ16 869 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
PRKCSH-210ENST00000589990 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 CYB561D2O14569 222 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 ITPKAP23677 461 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 IFNAR2P48551 515 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 SCAPQ12770 1279 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 ZNF268Q14587 947 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 ZRSR1Q15695 479 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 CRY1Q16526 586 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 DDR2Q16832 855 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 SLC39A4Q6P5W5 647 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 DEFB119Q8N690 84 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 SPPL2BQ8TCT7 592 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 BICD1Q96G01 975 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 CAMK1GQ96NX5 476 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 PYM1Q9BRP8 204 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 RPF1Q9H9Y2 349 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 PLXNB3Q9ULL4 1909 aa13.79□□□□□ -0.2
PRKCSH-210ENST00000589990 HELZP42694 1942 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 FAM221BA6H8Z2 402 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 TISP43B9A030 160 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 SGK1O00141 431 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 HCRTO43612 131 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 CYP2F1P24903 491 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 P2RY2P41231 377 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 LMAN2Q12907 356 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 ARL14EPQ8N8R7 260 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 SH3RF2Q8TEC5 729 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 ATP2A3Q93084 1043 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 GTPBP2Q9BX10 602 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 NUSAP1Q9BXS6 441 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 GCNT4Q9P109 453 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 CEP192Q8TEP8 1941 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 ACACAQ13085 2346 aa13.78□□□□□ -0.2
PRKCSH-210ENST00000589990 TNFRSF10BO14763 440 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 OGTO15294 1046 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 CFIP05156 583 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 CKMP06732 381 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 SLC6A11P48066 632 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 LIG4P49917 911 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 PDIA5Q14554 519 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 TMEM132DQ14C87 1099 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 LPCAT2Q7L5N7 544 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 SYT12Q8IV01 421 aa13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-210ENST00000589990 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms