RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 FAM186BQ8IYM0 893 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 DCP1BQ8IZD4 617 aaKnown RBP11.11□□□□□ -0.63
SDF2-208ENST00000589788 ADGRF2Q8IZF7 708 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 OR10T2Q8NGX3 314 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 TPCN2Q8NHX9 752 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 TMEM209Q96SK2 561 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
SDF2-208ENST00000589788 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.11□□□□□ -0.63
SDF2-208ENST00000589788 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 DOCK6Q96HP0 2047 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 MTMR11A4FU01 709 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 PSMA7O14818 248 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 CETN3O15182 167 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 AKAP3O75969 853 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 PCSK1P29120 753 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ATICP31939 592 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 PPP1R2P41236 205 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 SLC19A1P41440 591 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ALDH1A3P47895 512 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 LHX1P48742 406 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 VAMP7P51809 220 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 EPHB3P54753 998 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 TNNC1P63316 161 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 SMARCB1Q12824 385 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 USP4Q13107 963 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 COBLL1Q53SF7 1204 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ISM2Q6H9L7 571 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 DPH6Q7L8W6 267 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 ATAD1Q8NBU5 361 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 PLEKHO2Q8TD55 490 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 ZNF512Q96ME7 567 aaPredicted RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 RTP3Q9BQQ7 232 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 DNMT3BQ9UBC3 853 aaKnown RBP11.1□□□□□ -0.63
SDF2-208ENST00000589788 MAN1B1Q9UKM7 699 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 YIPF1Q9Y548 306 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 MYO10Q9HD67 2058 aa11.1□□□□□ -0.63
SDF2-208ENST00000589788 BIN1O00499 593 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 IKBKBO14920 756 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 RHOP08100 348 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 MYL6P60660 151 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 DLG4P78352 724 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MTMR3Q13615 1198 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 NFE2Q16621 373 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 SWI5Q1ZZU3 235 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 SOWAHAQ2M3V2 549 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MGAT5BQ3V5L5 792 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 CYP4A22Q5TCH4 519 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TDRD10Q5VZ19 366 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 SPPL2BQ8TCT7 592 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 DHTKD1Q96HY7 919 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MYADMQ96S97 322 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 SEPT5Q99719 369 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MKNK1Q9BUB5 465 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 SNX25Q9H3E2 840 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 HSFX1Q9UBD0 423 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 NXF1Q9UBU9 619 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 CDH7Q9ULB5 785 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 SORCS3Q9UPU3 1222 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 MRPS23Q9Y3D9 190 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 DOCK8Q8NF50 2099 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ZNF197O14709 1029 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 VNN2O95498 520 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 ADH1CP00326 375 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 C4BPAP04003 597 aaKnown RBP11.09□□□□□ -0.63
SDF2-208ENST00000589788 ASGR2P07307 311 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
SDF2-208ENST00000589788 LAMP2P13473 410 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms