RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 SNRNP35Q16560 246 aaKnown RBP13.1□□□□□ -0.31
VAT1-206ENST00000589709 DDR2Q16832 855 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 TXNDC11Q6PKC3 985 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 GPR161Q8N6U8 529 aaKnown RBP13.1□□□□□ -0.31
VAT1-206ENST00000589709 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
VAT1-206ENST00000589709 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 FAM13BQ9NYF5 915 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
VAT1-206ENST00000589709 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 FRYLO94915 3013 aa13.1□□□□□ -0.31
VAT1-206ENST00000589709 GPR15P49685 360 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 CCINQ13939 588 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 PSMD6Q15008 389 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 TXNDC8Q6A555 127 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 C4orf50Q6ZRC1 276 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 SPATA2LQ8IUW3 424 aaPredicted RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 DCLK2Q8N568 766 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 NUP210Q8TEM1 1887 aaPredicted RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 KBTBD7Q8WVZ9 684 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 GKN1Q9NS71 199 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 CDH9Q9ULB4 789 aa13.09□□□□□ -0.31
VAT1-206ENST00000589709 MAGED2Q9UNF1 606 aaPredicted RBP13.09□□□□□ -0.31
VAT1-206ENST00000589709 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 LMO2P25791 158 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 HOXA6P31267 233 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 ME1P48163 572 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 AMPD2Q01433 879 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 SATB1Q01826 763 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 TNK2Q07912 1038 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 CYP24A1Q07973 514 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 RUNX3Q13761 415 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 SECISBP2LQ93073 1101 aaKnown RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 FNBP1Q96RU3 617 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 NCDNQ9UBB6 729 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
VAT1-206ENST00000589709 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 CACNA1AO00555 2505 aa13.08□□□□□ -0.32
VAT1-206ENST00000589709 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 HCRTO43612 131 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 ATP2C2O75185 946 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TACC1O75410 805 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TADA3O75528 432 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 TNNI1P19237 187 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 CNR2P34972 360 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 PON2Q15165 354 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 PDGFRLQ15198 375 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 KNOP1Q1ED39 458 aaKnown RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 CC2D1AQ6P1N0 951 aaPredicted RBP13.07□□□□□ -0.32
VAT1-206ENST00000589709 NELFCDQ8IXH7 590 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 MYCBPAPQ8TBZ2 947 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TMEM174Q8WUU8 243 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 RMDN1Q96DB5 314 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 CGRRF1Q99675 332 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 BLZF1Q9H2G9 400 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
VAT1-206ENST00000589709 TRAV19A0A0A6YYK7 116 aa13.06□□□□□ -0.32
VAT1-206ENST00000589709 K7ESF4 209 aa13.06□□□□□ -0.32
VAT1-206ENST00000589709 CLIC2O15247 247 aa13.06□□□□□ -0.32
VAT1-206ENST00000589709 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
VAT1-206ENST00000589709 TCF3P15923 654 aa13.06□□□□□ -0.32
VAT1-206ENST00000589709 PFKLP17858 780 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms