RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 MCRS1Q96EZ8 462 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 PCED1BQ96HM7 432 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 TNIP3Q96KP6 325 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 SPATA17Q96L03 361 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 LPIN3Q9BQK8 851 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 APOBEC3GQ9HC16 384 aaKnown RBP18.74■□□□□ 0.59
H3F3B-207ENST00000589417 ZNF334Q9HCZ1 680 aaPredicted RBP18.74■□□□□ 0.59
H3F3B-207ENST00000589417 SLC2A4RGQ9NR83 387 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 RWDD2AQ9UIY3 292 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 ZMYM5Q9UJ78 669 aa18.74■□□□□ 0.59
H3F3B-207ENST00000589417 NOL4O94818 638 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 SRFP11831 508 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 NOP14P78316 857 aaKnown RBP18.73■□□□□ 0.59
H3F3B-207ENST00000589417 CCDC142Q17RM4 750 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 SPOPLQ6IQ16 392 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 B3GALNT2Q8NCR0 500 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 ING5Q8WYH8 240 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 SEMA4DQ92854 862 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 ELSPBP1Q96BH3 223 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 TRMT2BQ96GJ1 504 aaKnown RBP18.73■□□□□ 0.59
H3F3B-207ENST00000589417 ASB16Q96NS5 453 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 RPP25Q9BUL9 199 aaKnown RBP18.73■□□□□ 0.59
H3F3B-207ENST00000589417 NIF3L1Q9GZT8 377 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 WNT16Q9UBV4 365 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 MYO10Q9HD67 2058 aa18.73■□□□□ 0.59
H3F3B-207ENST00000589417 FAM86C2PA6NEL3 165 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 F11P03951 625 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 FCARP24071 287 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CDC25CP30307 473 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 DDR2Q16832 855 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CBWD6Q4V339 395 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CBWD3Q5JTY5 395 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 FAM78AQ5JUQ0 283 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CBWD5Q5RIA9 395 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 TMEM150AQ86TG1 271 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 TTC39CQ8N584 583 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 FAM200AQ8TCP9 573 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 GIPC2Q8TF65 315 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 SMARCD2Q92925 531 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 C8orf48Q96LL4 319 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 ZSWIM3Q96MP5 696 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 MED15Q96RN5 788 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 NUP62CLQ9H1M0 184 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 SMOC2Q9H3U7 446 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 DPEP3Q9H4B8 488 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
H3F3B-207ENST00000589417 A0A1W2PRU2 124 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 GOLGA6L22H0YM25 854 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 P4HA2O15460 535 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 LRRN2O75325 713 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 FGFR1OPO95684 399 aaKnown RBP18.71■□□□□ 0.59
H3F3B-207ENST00000589417 BDNFP23560 247 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 GABRR2P28476 465 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 GPR15P49685 360 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 TEAD2Q15562 447 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 MDH1BQ5I0G3 518 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 CT47A1Q5JQC4 288 aaPredicted RBP18.71■□□□□ 0.59
H3F3B-207ENST00000589417 HFE2Q6ZVN8 426 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 E2F7Q96AV8 911 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 ELMO3Q96BJ8 720 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 B3GNT5Q9BYG0 378 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 ELOVL4Q9GZR5 314 aa18.71■□□□□ 0.59
H3F3B-207ENST00000589417 UXTQ9UBK9 157 aaPredicted RBP18.71■□□□□ 0.59
H3F3B-207ENST00000589417 SLC38A8A6NNN8 435 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 TRIM66O15016 1216 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 GJA1P17302 382 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 CDR1P51861 262 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 NDST1P52848 882 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 STX17P56962 302 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 NLRP12P59046 1061 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 TAF12Q16514 161 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 DCAF17Q5H9S7 520 aaPredicted RBP18.7■□□□□ 0.58
H3F3B-207ENST00000589417 TCERG1LQ5VWI1 586 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 TANGO2Q6ICL3 276 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 RBM43Q6ZSC3 357 aaKnown RBP18.7■□□□□ 0.58
H3F3B-207ENST00000589417 PAQR9Q6ZVX9 377 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 GPT2Q8TD30 523 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 SRRTQ9BXP5 876 aaKnown RBP18.7■□□□□ 0.58
H3F3B-207ENST00000589417 ATXN3LQ9H3M9 355 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 TASP1Q9H6P5 420 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 ZFP14Q9HCL3 533 aa18.7■□□□□ 0.58
H3F3B-207ENST00000589417 NARSO43776 548 aaKnown RBP18.69■□□□□ 0.58
H3F3B-207ENST00000589417 CILPO75339 1184 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 DDX6P26196 483 aaKnown RBP eCLIP18.69■□□□□ 0.589e-12■□□□□ 9
H3F3B-207ENST00000589417 ERCC5P28715 1186 aaPredicted RBP18.69■□□□□ 0.58
H3F3B-207ENST00000589417 FMO5P49326 533 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 CYP27A1Q02318 531 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 ARHGAP15Q53QZ3 475 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 WDR44Q5JSH3 913 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 SCARA5Q6ZMJ2 495 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 ZSCAN18Q8TBC5 510 aaPredicted RBP18.69■□□□□ 0.58
H3F3B-207ENST00000589417 GPR152Q8TDT2 470 aa18.69■□□□□ 0.58
H3F3B-207ENST00000589417 WHAMMQ8TF30 809 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms