RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 DEPTORQ8TB45 409 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 MRPS27Q92552 414 aaKnown RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 TMX3Q96JJ7 454 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 TM9SF2Q99805 663 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 HSD17B14Q9BPX1 270 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 RC3H2Q9HBD1 1191 aaKnown RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 IFT122Q9HBG6 1241 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 TUFT1Q9NNX1 390 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 CD207Q9UJ71 328 aa9.08□□□□□ -0.96
DNMT1-219ENST00000589349 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-219ENST00000589349 MED24O75448 989 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 NPTXRO95502 500 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 ALDH2P05091 517 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 OR1G1P47890 313 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 MCM2P49736 904 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 RARRES1P49788 294 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 ERVFC1P60507 584 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 DLX2Q07687 328 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-219ENST00000589349 SPIRE1Q08AE8 756 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 KRT79Q5XKE5 535 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 LARP1BQ659C4 914 aaKnown RBP9.07□□□□□ -0.96
DNMT1-219ENST00000589349 NOTUMQ6P988 496 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 LRRC55Q6ZSA7 311 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 CDR2LQ86X02 465 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-219ENST00000589349 TAB3Q8N5C8 712 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-219ENST00000589349 MCPH1Q8NEM0 835 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 IFT74Q96LB3 600 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 CEP89Q96ST8 783 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 PLIN2Q99541 437 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 ACBD3Q9H3P7 528 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 CWH43Q9H720 699 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 MINDY3Q9H8M7 445 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 POLD4Q9HCU8 107 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 AGPAT5Q9NUQ2 364 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 BARX2Q9UMQ3 279 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-219ENST00000589349 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 PCDHB6Q9Y5E3 794 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
DNMT1-219ENST00000589349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 VPS37CA5D8V6 355 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 CCDC169A6NNP5 214 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 OFD1O75665 1012 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 LINC00271P0C7V0 271 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 XRCC6P12956 609 aaKnown RBP eCLIP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 GLRA2P23416 452 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 SP100P23497 879 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 TRAPPC10P48553 1259 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 CAPSQ13938 189 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 SMC1AQ14683 1233 aaKnown RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 VPS52Q8N1B4 723 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 EFHBQ8N7U6 833 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 AUTS2Q8WXX7 1259 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 DHRS1Q96LJ7 313 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 RPS6KC1Q96S38 1066 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 EIF2AQ9BY44 585 aaKnown RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 DUSP15Q9H1R2 295 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 BHMT2Q9H2M3 363 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 NGRNQ9NPE2 291 aaKnown RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 DDX19AQ9NUU7 478 aaKnown RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 TBC1D13Q9NVG8 400 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 DNM3Q9UQ16 869 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 PRG3Q9Y2Y8 225 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-219ENST00000589349 HES2Q9Y543 173 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
DNMT1-219ENST00000589349 NLRC5Q86WI3 1866 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 VWA3AA6NCI4 1184 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 HIDE1A8MVS5 230 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 B4GALT5O43286 388 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 TSPAN1O60635 241 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 LRRN2O75325 713 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 TBX10O75333 385 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 LYPLA2O95372 231 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MYBP10242 640 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 SRFP11831 508 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 ATF7P17544 494 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 AKAP5P24588 427 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 RPA1P27694 616 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 CDC25AP30304 524 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 AXLP30530 894 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 ARL2P36404 184 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MLH1P40692 756 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MATR3P43243 847 aaKnown RBP eCLIP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 PTENP60484 403 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 RBM10P98175 930 aaKnown RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 ORC2Q13416 577 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 ADAM15Q13444 863 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 SMAD4Q13485 552 aaKnown RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 PRPF4BQ13523 1007 aaKnown RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 CAMK1Q14012 370 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MAPK6Q16659 721 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms