RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 DGKHQ86XP1 1220 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 ATRIPQ8WXE1 791 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 PCGF6Q9BYE7 350 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 MS4A7Q9GZW8 240 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZNF287Q9HBT7 754 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 A1CFQ9NQ94 594 aaKnown RBP4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 SACM1LQ9NTJ5 587 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 EHD3Q9NZN3 535 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 POLR2AP24928 1970 aaKnown RBP4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 KAT6AQ92794 2004 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 USP19O94966 1318 aa4.39□□□□□ -1.71
HMGN1P30-201ENST00000589286 A6NNZ2 444 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 ADM5C9JUS6 153 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 TBX3O15119 743 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 TLR5O60602 858 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 URI1O94763 535 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 MAP4K4O95819 1239 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 TTLL1O95922 423 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 RHCEP18577 417 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 PEX2P28328 305 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 GRIA3P42263 894 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 HNRNPMP52272 730 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 RHDQ02161 417 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 TBCCQ15814 346 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 CNGA2Q16280 664 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 TXNRD1Q16881 649 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 FAM153CQ494X1 144 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZNF618Q5T7W0 954 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 PEG10Q86TG7 708 aaKnown RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 COL23A1Q86Y22 540 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 FAM109AQ8N4B1 249 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 SIMC1Q8NDZ2 872 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 APIPQ96GX9 242 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 PBKQ96KB5 322 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 C8orf48Q96LL4 319 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 DPH1Q9BZG8 443 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 SLC17A6Q9P2U8 582 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 AFF4Q9UHB7 1163 aaKnown RBP4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 SERTAD3Q9UJW9 196 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 ADGRA2Q96PE1 1338 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 SALL3Q9BXA9 1300 aa4.38□□□□□ -1.71
HMGN1P30-201ENST00000589286 PPM1DO15297 605 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 SUV39H1O43463 412 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 RHOP08100 348 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 NR2F6P10588 404 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 MYF5P13349 255 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZFXP17010 805 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 RPL17P18621 184 aaKnown RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 ALDH9A1P49189 494 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 MAPK10P53779 464 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 COL10A1Q03692 680 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 EIF2B5Q13144 721 aaKnown RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 BMPR2Q13873 1038 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 PLA1AQ53H76 456 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 HSP90AB2PQ58FF8 381 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 AKNAD1Q5T1N1 836 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 DTX2Q86UW9 622 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 GAS2L3Q86XJ1 694 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 SLC15A3Q8IY34 581 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 RAPGEF4Q8WZA2 1011 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 NELL1Q92832 810 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 NMD3Q96D46 503 aaKnown RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 PPP1R9BQ96SB3 815 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 MESP1Q9BRJ9 268 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 NUP62CLQ9H1M0 184 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 BHMT2Q9H2M3 363 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 GEMIN8Q9NWZ8 242 aaKnown RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 FOXJ2Q9P0K8 574 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 CPNE7Q9UBL6 633 aa4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 NDRG4Q9ULP0 352 aaKnown RBP4.37□□□□□ -1.71
HMGN1P30-201ENST00000589286 TRIM43BA6NCK2 446 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 MBD3L4A6NDZ8 208 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 MBD3L3A6NE82 208 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 GCOM1H8Y6P7 765 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 SLC16A3O15427 465 aaKnown RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 RASSF9O75901 435 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 ONECUT2O95948 504 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 NDUFB7P17568 137 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 CACNA2D1P54289 1103 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 PRKAG1P54619 331 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 ELLP55199 621 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 HLTFQ14527 1009 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 INSCQ1MX18 579 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 ZNF551Q7Z340 670 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 CCAR1Q8IX12 1150 aaKnown RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 DNAJC10Q8IXB1 793 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 SPSB4Q96A44 273 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 TRIM43Q96BQ3 446 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 CRAMP1Q96RY5 1269 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 SMURF2Q9HAU4 748 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 GLOD4Q9HC38 313 aa4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 TRMT13Q9NUP7 481 aaKnown RBP4.36□□□□□ -1.71
HMGN1P30-201ENST00000589286 SNX13Q9Y5W8 968 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms