RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 GDE1Q9NZC3 331 aa10.55□□□□□ -0.72
PTPN2-208ENST00000589216 CDH9Q9ULB4 789 aa10.55□□□□□ -0.72
PTPN2-208ENST00000589216 CA14Q9ULX7 337 aa10.55□□□□□ -0.72
PTPN2-208ENST00000589216 CTNND2Q9UQB3 1225 aa10.55□□□□□ -0.72
PTPN2-208ENST00000589216 R3HCC1Q9Y3T6 440 aaKnown RBP10.55□□□□□ -0.72
PTPN2-208ENST00000589216 ZFP37Q9Y6Q3 630 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-208ENST00000589216 CLDN5O00501 218 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 ZNF197O14709 1029 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 IKBKBO14920 756 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 KRT13P13646 458 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 NPR3P17342 541 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 CCNE1P24864 410 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 RPL13P26373 211 aaKnown RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 VIPR2P41587 438 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 TUFMP49411 452 aaKnown RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 AP3M2P53677 418 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 NOP14P78316 857 aaKnown RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 GPC5P78333 572 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SMARCB1Q12824 385 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 VEPH1Q14D04 833 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 CFAP221Q4G0U5 840 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 DCAF17Q5H9S7 520 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 VITQ6UXI7 678 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 MTSS1LQ765P7 747 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SPATA2LQ8IUW3 424 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SIX5Q8N196 739 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 TMEM105Q8N8V8 129 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 B3GALNT2Q8NCR0 500 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 RIN3Q8TB24 985 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 ZSCAN18Q8TBC5 510 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 PCED1BQ96HM7 432 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 TWNKQ96RR1 684 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 ARID3AQ99856 593 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SMG9Q9H0W8 520 aaKnown RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SNX25Q9H3E2 840 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 HOOK1Q9UJC3 728 aaKnown RBP10.54□□□□□ -0.72
PTPN2-208ENST00000589216 ASB3Q9Y575 518 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 F5P12259 2224 aa10.54□□□□□ -0.72
PTPN2-208ENST00000589216 SLC38A8A6NNN8 435 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 A8MXQ7 604 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 PSMA7O14818 248 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 CETN3O15182 167 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 NOL4O94818 638 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 MICAL2O94851 1124 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 EPB41P11171 864 aaKnown RBP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 BDNFP23560 247 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 GNL1P36915 607 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 MXI1P50539 228 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 STX17P56962 302 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 NLRP12P59046 1061 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 USP46P62068 366 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 CYP27A1Q02318 531 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 LRRC63Q05C16 580 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 GPR158Q5T848 1215 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 FAM35AQ86V20 835 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SCN4BQ8IWT1 228 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 LEMD2Q8NC56 503 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 NELFBQ8WX92 580 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SMARCD2Q92925 531 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SLC35C1Q96A29 364 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 FUBP3Q96I24 572 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 LRRC3BQ96PB8 259 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 MED15Q96RN5 788 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 ATXN3LQ9H3M9 355 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SLC2A4RGQ9NR83 387 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
PTPN2-208ENST00000589216 MAGED2Q9UNF1 606 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-208ENST00000589216 SHISA7A6NL88 538 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 F8VP50 259 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 ECI2O75521 394 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 F11P03951 625 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 CCDC130P13994 396 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 MAGEA11P43364 429 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 NDST1P52848 882 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 FKBP3Q00688 224 aaKnown RBP10.52□□□□□ -0.73
PTPN2-208ENST00000589216 ENPEPQ07075 957 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 INCA1Q0VD86 236 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 C4orf50Q6ZRC1 276 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 CLEC17AQ6ZS10 378 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 PAQR9Q6ZVX9 377 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 ACOT1Q86TX2 421 aa10.52□□□□□ -0.73
PTPN2-208ENST00000589216 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms