RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	TNNC1	P63316	161 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	DLG4	P78352	724 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	CYP27A1	Q02318	531 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	DPYD	Q12882	1025 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	BIRC3	Q13489	604 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	BECN1	Q14457	450 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	TDRD10	Q5VZ19	366 aa	Known RBP	27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	TXNDC8	Q6A555	127 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	FAM171B	Q6P995	826 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	E2F7	Q96AV8	911 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	SNX25	Q9H3E2	840 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	ABCB6	Q9NP58	842 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	CDH9	Q9ULB4	789 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	TICRR	Q7Z2Z1	1910 aa		27.58	■■■□□ 2.01
TPGS2-208	ENST00000588909	ZNF202	O95125	648 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	NR3C1	P04150	777 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	CSH1	P0DML2	217 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	CSH2	P0DML3	217 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	BDNF	P23560	247 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	FCHO2	Q0JRZ9	810 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	MDH1B	Q5I0G3	518 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	CEP135	Q66GS9	1140 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	OR6B3	Q8NGW1	331 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	CSGALNACT1	Q8TDX6	532 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	PARD3B	Q8TEW8	1205 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	DPEP3	Q9H4B8	488 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	MAGEC2	Q9UBF1	373 aa	Predicted RBP	27.57	■■■□□ 2
TPGS2-208	ENST00000588909	COL4A2	P08572	1712 aa		27.57	■■■□□ 2
TPGS2-208	ENST00000588909	PROB1	E7EW31	1015 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	PDXK	O00764	312 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	TADA3	O75528	432 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	MYL1	P05976	194 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	GNL1	P36915	607 aa	Predicted RBP	27.56	■■■□□ 2
TPGS2-208	ENST00000588909	FZD5	Q13467	585 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	CFAP221	Q4G0U5	840 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	MAML2	Q8IZL2	1156 aa	Predicted RBP	27.56	■■■□□ 2
TPGS2-208	ENST00000588909	CMTM8	Q8IZV2	173 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	FAM3C	Q92520	227 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	OSBPL6	Q9BZF3	934 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	XYLT2	Q9H1B5	865 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	CCL26	Q9Y258	94 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	MIA3	Q5JRA6	1907 aa		27.56	■■■□□ 2
TPGS2-208	ENST00000588909	PRR23A	A6NEV1	266 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	CHAD	O15335	359 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	RHOBTB3	O94955	611 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	SP9	P0CG40	484 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	CCNE1	P24864	410 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	RAP1GAP	P47736	663 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	KPNA1	P52294	538 aa	Predicted RBP	27.55	■■■□□ 2
TPGS2-208	ENST00000588909	TNK2	Q07912	1038 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	SCARA5	Q6ZMJ2	495 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	C4orf50	Q6ZRC1	276 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	PCED1B	Q96HM7	432 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	SMYD3	Q9H7B4	428 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	TRPV5	Q9NQA5	729 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	GTSE1	Q9NYZ3	720 aa		27.55	■■■□□ 2
TPGS2-208	ENST00000588909	MRPS17	Q9Y2R5	130 aa	Known RBP	27.55	■■■□□ 2
TPGS2-208	ENST00000588909	MAN2B1	O00754	1011 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	NOL4	O94818	638 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	VNN1	O95497	513 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	CDH8	P55286	799 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	SLC9A9	Q8IVB4	645 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	TTC16	Q8NEE8	873 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	BPIFB1	Q8TDL5	484 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	MRPS31	Q92665	395 aa	Known RBP	27.54	■■■□□ 2
TPGS2-208	ENST00000588909	NKD2	Q969F2	451 aa	Predicted RBP	27.54	■■■□□ 2
TPGS2-208	ENST00000588909	CCDC47	Q96A33	483 aa	Known RBP	27.54	■■■□□ 2
TPGS2-208	ENST00000588909	FUBP3	Q96I24	572 aa	Known RBP eCLIP	27.54	■■■□□ 2
TPGS2-208	ENST00000588909	NELL2	Q99435	816 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	TRPC7	Q9HCX4	862 aa		27.54	■■■□□ 2
TPGS2-208	ENST00000588909	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	27.54	■■■□□ 2	4e-13	■■■■■ 74.5
TPGS2-208	ENST00000588909	LAMTOR5	O43504	91 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	TACC1	O75410	805 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	C4BPA	P04003	597 aa	Known RBP	27.53	■■■□□ 2
TPGS2-208	ENST00000588909	AVPR1A	P37288	418 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	GRIK1	P39086	918 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	NCOA4	Q13772	614 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	ZNF699	Q32M78	642 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	ZNF687	Q8N1G0	1237 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	MYCBPAP	Q8TBZ2	947 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909	USP13	Q92995	863 aa	Predicted RBP	27.53	■■■□□ 2
TPGS2-208	ENST00000588909	SYAP1	Q96A49	352 aa	Predicted RBP	27.53	■■■□□ 2
TPGS2-208	ENST00000588909	CLDN23	Q96B33	292 aa		27.53	■■■□□ 2
TPGS2-208	ENST00000588909		A8MXQ7	604 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	NCAM2	O15394	837 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CALU	O43852	315 aa	Predicted RBP	27.52	■■■□□ 2
TPGS2-208	ENST00000588909	MAGEA11	P43364	429 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CSTF1	Q05048	431 aa	Known RBP	27.52	■■■□□ 2
TPGS2-208	ENST00000588909	TSSK4	Q6SA08	328 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	SMYD4	Q8IYR2	804 aa	Predicted RBP	27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CELF5	Q8N6W0	485 aa	Known RBP	27.52	■■■□□ 2
TPGS2-208	ENST00000588909	RIN3	Q8TB24	985 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CYP2S1	Q96SQ9	504 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	OBP2A	Q9NY56	170 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	NUP210	Q8TEM1	1887 aa	Predicted RBP	27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CFAP54	Q96N23	3096 aa		27.52	■■■□□ 2
TPGS2-208	ENST00000588909	CLDN5	O00501	218 aa		27.51	■■□□□ 1.99
TPGS2-208	ENST00000588909	STAU1	O95793	577 aa	Known RBP	27.51	■■□□□ 1.99
TPGS2-208	ENST00000588909	PTPN1	P18031	435 aa	Known RBP	27.51	■■□□□ 1.99
TPGS2-208	ENST00000588909	WEE1	P30291	646 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms