RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 TAS2R40P59535 323 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 TNFAIP2Q03169 654 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 PRKCZQ05513 592 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 SPARCL1Q14515 664 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 SETDB1Q15047 1291 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 NUGGCQ68CJ6 796 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 VSTM1Q6UX27 236 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 METTL7BQ6UX53 244 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 RGS9BPQ6ZS82 235 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 PLPPR4Q7Z2D5 763 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 C7orf61Q8IZ16 206 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 FBF1Q8TES7 1133 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 SMC6Q96SB8 1091 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 FRMD8Q9BZ67 464 aaPredicted RBP14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 RXFP1Q9HBX9 757 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 PRDM6Q9NQX0 595 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 R3HDM2Q9Y2K5 976 aaKnown RBP14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 AFG3L2Q9Y4W6 797 aa14.78□□□□□ -0.04
NEDD4L-223ENST00000588516 SIGLEC16A6NMB1 481 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 RASA4BC9J798 803 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 TP73O15350 636 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 MAGEB2O15479 319 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 RASA4O43374 803 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 B4GALT4O60513 344 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 PRKCBP05771 671 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ATF7P17544 494 aaPredicted RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 CD58P19256 250 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ATP4AP20648 1035 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 EDNRBP24530 442 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ARSEP51690 589 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ARL4CP56559 192 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 SNX16P57768 344 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 CAPSQ13938 189 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ZNF268Q14587 947 aaPredicted RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 KLHL38Q2WGJ6 581 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ZNF699Q32M78 642 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 SPDYAQ5MJ70 313 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 SPOPLQ6IQ16 392 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 SEPT14Q6ZU15 432 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 CPNE8Q86YQ8 564 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 PASD1Q8IV76 773 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 PAWRQ96IZ0 340 aaKnown RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 DEFB118Q96PH6 123 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 RAB3IPQ96QF0 476 aaPredicted RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 TGS1Q96RS0 853 aaKnown RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 ACO2Q99798 780 aaKnown RBP14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 CYP3A43Q9HB55 503 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 SAYSD1Q9NPB0 183 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 CISHQ9NSE2 258 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 TXLNGQ9NUQ3 528 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 KIAA1257Q9ULG3 409 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.04
NEDD4L-223ENST00000588516 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 HNRNPCL1O60812 293 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 ATICP31939 592 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 FCGRTP55899 365 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PLCB3Q01970 1234 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 RNASELQ05823 741 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 POU5F1BQ06416 359 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 GPS1Q13098 491 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 TRIP13Q15645 432 aaPredicted RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PPP1R15BQ5SWA1 713 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 MPZL3Q6UWV2 235 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 TSHZ1Q6ZSZ6 1077 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PPIL6Q8IXY8 311 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 ANKRD42Q8N9B4 389 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PRPF31Q8WWY3 499 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 ZKSCAN4Q969J2 545 aaPredicted RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 ZBTB45Q96K62 511 aaPredicted RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PITPNM3Q9BZ71 974 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 DNAI2Q9GZS0 605 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 PSMC3IPQ9P2W1 217 aaPredicted RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 CPSF3Q9UKF6 684 aaKnown RBP14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 STARD13Q9Y3M8 1113 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 SNCAIPQ9Y6H5 919 aa14.76□□□□□ -0.05
NEDD4L-223ENST00000588516 TCRBV5S1A1TA0A578 114 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 PDHXO00330 501 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 ACKR2O00590 384 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 MSCO60682 206 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 LGR5O75473 907 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 SPAG6O75602 509 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 DCTN3O75935 186 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 RNF8O76064 485 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 ZWINTO95229 277 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 SYN1P17600 705 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 UBA1P22314 1058 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 GJC1P36383 396 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 VPS41P49754 854 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 RASSF2P50749 326 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 PPIL2Q13356 520 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 SEPT7Q16181 437 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 CCDC38Q502W7 563 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 ZNF667Q5HYK9 610 aa14.75□□□□□ -0.05
NEDD4L-223ENST00000588516 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms