RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 TUBD1Q9UJT1 453 aa7.62□□□□□ -1.19
TPM4-210ENST00000588507 MYO18AQ92614 2054 aaKnown RBP7.62□□□□□ -1.19
TPM4-210ENST00000588507 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
TPM4-210ENST00000588507 CSPG4Q6UVK1 2322 aa7.62□□□□□ -1.19
TPM4-210ENST00000588507 ARID2Q68CP9 1835 aa7.62□□□□□ -1.19
TPM4-210ENST00000588507 STAB1Q9NY15 2570 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 A0A1B0GTQ1 180 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 ARHGAP10A1A4S6 786 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 MYMKA6NI61 221 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 MEIS1O00470 390 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 IPO8O15397 1037 aaKnown RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 CYTH3O43739 400 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 NADKO95544 446 aaPredicted RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 HOXB2P14652 356 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 ABCB4P21439 1286 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 TNFRSF4P43489 277 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 BRCC3P46736 316 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 PRKCEQ02156 737 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 MRPL58Q14197 206 aaKnown RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 CTXN3Q4LDR2 81 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 CEP85Q6P2H3 762 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 ITIH5Q86UX2 942 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 SFTPA1Q8IWL2 248 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 MCEMP1Q8IX19 187 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 TOE1Q96GM8 510 aaKnown RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 CPB2Q96IY4 423 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 YTHDC1Q96MU7 727 aaKnown RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 PNKPQ96T60 521 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 RNF41Q9H4P4 317 aaPredicted RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 RUBCNLQ9H714 662 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 PSTPIP2Q9H939 334 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 CD93Q9NPY3 652 aa7.61□□□□□ -1.19
TPM4-210ENST00000588507 WSB2Q9NYS7 404 aaPredicted RBP7.61□□□□□ -1.19
TPM4-210ENST00000588507 ANK1P16157 1881 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 A0A0A0MRY4 1105 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CDRT15L2A8MXV6 281 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 PTGESO14684 152 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 TSPAN1O60635 241 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CSO75390 466 aaKnown RBP7.6□□□□□ -1.19
TPM4-210ENST00000588507 KAT7O95251 611 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 FGAP02671 866 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 SRGAP2CP0DJJ0 459 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 TRIM27P14373 513 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CPB1P15086 417 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 ACP1P24666 158 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CTSKP43235 329 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 GRIA4P48058 902 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 MLLT10P55197 1068 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 HAND2P61296 217 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 DDX10Q13206 875 aaKnown RBP7.6□□□□□ -1.19
TPM4-210ENST00000588507 ZNF268Q14587 947 aaPredicted RBP7.6□□□□□ -1.19
TPM4-210ENST00000588507 PCBP1Q15365 356 aaKnown RBP eCLIP7.6□□□□□ -1.19
TPM4-210ENST00000588507 NAB2Q15742 525 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 UBE2SQ16763 222 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 SMTNL2Q2TAL5 461 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 MTERF2Q49AM1 385 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CCDC184Q52MB2 194 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 C3orf38Q5JPI3 329 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 VPS53Q5VIR6 699 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CDCP2Q5VXM1 449 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 PADI6Q6TGC4 694 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CD300LGQ6UXG3 332 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 SV2AQ7L0J3 742 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 EFCAB13Q8IY85 973 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 MIER1Q8N108 512 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 MAB21L3Q8N8X9 362 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 PIBF1Q8WXW3 757 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 HPS3Q969F9 1004 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 OSGEPQ9NPF4 335 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 CASS4Q9NQ75 786 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 SATB2Q9UPW6 733 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 TNNQ9UQP3 1299 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 COL4A3BPQ9Y5P4 624 aa7.6□□□□□ -1.19
TPM4-210ENST00000588507 ZNF638Q14966 1978 aaKnown RBP7.59□□□□□ -1.19
TPM4-210ENST00000588507 A0A1W2PQF6 199 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 DDX11L8A8MPP1 907 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 SYN3O14994 580 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 CYP26A1O43174 497 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 RTN2O75298 545 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 NFATC1O95644 943 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 CT47B1P0C2W7 299 aaPredicted RBP7.59□□□□□ -1.19
TPM4-210ENST00000588507 DDX6P26196 483 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■□□□□ 10.8
TPM4-210ENST00000588507 TNFSF9P41273 254 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 NT5C2P49902 561 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 POLE2P56282 527 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 GRIN1Q05586 938 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 DUSP4Q13115 394 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 ZNF280DQ6N043 979 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 BORAQ6PGQ7 559 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 RSRC2Q7L4I2 434 aaKnown RBP7.59□□□□□ -1.19
TPM4-210ENST00000588507 TAOK1Q7L7X3 1001 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 CLEC14AQ86T13 490 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 SGMS1Q86VZ5 419 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 BEST2Q8NFU1 509 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 KCNV2Q8TDN2 545 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 SAP25Q8TEE9 199 aa7.59□□□□□ -1.19
TPM4-210ENST00000588507 IPO4Q8TEX9 1081 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms