RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
CIRBP-217ENST00000588230 CRTAC1Q9NQ79 661 aa20.5■□□□□ 0.87
CIRBP-217ENST00000588230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■■■■ 57
CIRBP-217ENST00000588230 MAGEC2Q9UBF1 373 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-217ENST00000588230 ARMCX3Q9UH62 379 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-217ENST00000588230 MYO15AQ9UKN7 3530 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 FGF19O95750 216 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 CFHP08603 1231 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 GJA1P17302 382 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 PTPN1P18031 435 aaKnown RBP20.49■□□□□ 0.87
CIRBP-217ENST00000588230 RAP1GAPP47736 663 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 MXI1P50539 228 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 CYP27A1Q02318 531 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 PAK1Q13153 545 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 CFAP221Q4G0U5 840 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 DCAF17Q5H9S7 520 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-217ENST00000588230 SPOPLQ6IQ16 392 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 TTI2Q6NXR4 508 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 FOXR2Q6PJQ5 311 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 FILIP1Q7Z7B0 1213 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 TMC8Q8IU68 726 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 SCN4BQ8IWT1 228 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 SIX5Q8N196 739 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 MYCBPAPQ8TBZ2 947 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 GPR152Q8TDT2 470 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 MYLPFQ96A32 169 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 CEP63Q96MT8 703 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 DUSP9Q99956 384 aaKnown RBP20.49■□□□□ 0.87
CIRBP-217ENST00000588230 METTL14Q9HCE5 456 aaKnown RBP20.49■□□□□ 0.87
CIRBP-217ENST00000588230 SLC2A4RGQ9NR83 387 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 LMBRD1Q9NUN5 540 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 WNT16Q9UBV4 365 aa20.49■□□□□ 0.87
CIRBP-217ENST00000588230 A0A1W2PRU2 124 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 GOLGA6L22H0YM25 854 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 GPR15P49685 360 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 STX17P56962 302 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 TEAD2Q15562 447 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 DDR2Q16832 855 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 CCDC40Q4G0X9 1142 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 MDH1BQ5I0G3 518 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 ASTLQ6HA08 431 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-217ENST00000588230 SHKBP1Q8TBC3 707 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 GPR88Q9GZN0 384 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 SDCBP2Q9H190 292 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 SLITRK6Q9H5Y7 841 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 ZNF334Q9HCZ1 680 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-217ENST00000588230 NME7Q9Y5B8 376 aa20.48■□□□□ 0.87
CIRBP-217ENST00000588230 DMDP11532 3685 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 FCARP24071 287 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 GABRR2P28476 465 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 HOXD11P31277 338 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-217ENST00000588230 MAGEA11P43364 429 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 NOP14P78316 857 aaKnown RBP20.47■□□□□ 0.87
CIRBP-217ENST00000588230 SDHAF4Q5VUM1 108 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 FRMD5Q7Z6J6 570 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 FBXL13Q8NEE6 735 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 PCED1BQ96HM7 432 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 TNIP3Q96KP6 325 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 GCNAQ96QF7 691 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 KXD1Q9BQD3 176 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 NUP62CLQ9H1M0 184 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 ATXN3LQ9H3M9 355 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 DPEP3Q9H4B8 488 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 FBXL21Q9UKT6 434 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 COL4A3Q01955 1670 aa20.47■□□□□ 0.87
CIRBP-217ENST00000588230 PI15O43692 258 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 CSH1P0DML2 217 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 CSH2P0DML3 217 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 BDNFP23560 247 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 GRIK1P39086 918 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 ASPAP45381 313 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 CLCN5P51795 746 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 ARHGAP15Q53QZ3 475 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 FAM78AQ5JUQ0 283 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 VSTM1Q6UX27 236 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 GAREM2Q75VX8 874 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 B3GALNT2Q8NCR0 500 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 ZSWIM3Q96MP5 696 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 NIF3L1Q9GZT8 377 aa20.46■□□□□ 0.87
CIRBP-217ENST00000588230 MAGED2Q9UNF1 606 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-217ENST00000588230 USP34Q70CQ2 3546 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 ECI2O75521 394 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 AOC1P19801 751 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 CDC25CP30307 473 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 NUBP1P53384 320 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 GPC5P78333 572 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 WDR44Q5JSH3 913 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 MLKLQ8NB16 471 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 SEMA4DQ92854 862 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 SMARCD2Q92925 531 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 ASB16Q96NS5 453 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 PRRX2Q99811 253 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 BCO2Q9BYV7 579 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 PLA2G2FQ9BZM2 168 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 MFSD1Q9H3U5 465 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 CYP3A43Q9HB55 503 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 APOBEC3GQ9HC16 384 aaKnown RBP20.45■□□□□ 0.86
CIRBP-217ENST00000588230 ZFP14Q9HCL3 533 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 RAB20Q9NX57 234 aa20.45■□□□□ 0.86
CIRBP-217ENST00000588230 CA14Q9ULX7 337 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms