RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 RIC8AQ9NPQ8 531 aa6.34□□□□□ -1.39
TUBD1-208ENST00000588009 VPS45Q9NRW7 570 aa6.34□□□□□ -1.39
TUBD1-208ENST00000588009 CA14Q9ULX7 337 aa6.34□□□□□ -1.39
TUBD1-208ENST00000588009 MTO1Q9Y2Z2 717 aaKnown RBP6.34□□□□□ -1.39
TUBD1-208ENST00000588009 HS3ST4Q9Y661 456 aa6.34□□□□□ -1.39
TUBD1-208ENST00000588009 TCAF2A6NFQ2 919 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 AQP7P3A6NL99 342 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 FCHO1O14526 889 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 CDC14BO60729 498 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 TRIM13O60858 407 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 COQ9O75208 318 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 USP1O94782 785 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 GLP2RO95838 553 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 KRT1P04264 644 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ATXN1LP0C7T5 689 aaKnown RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 FCER1AP12319 257 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 GYS1P13807 737 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 GNAT2P19087 354 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 MGAT1P26572 445 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 CST5P28325 142 aaPredicted RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ADD2P35612 726 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 AFF3P51826 1226 aaKnown RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 CHN2P52757 468 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 PNLIPRP1P54315 467 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 PIGFQ07326 219 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 NSUN2Q08J23 767 aaKnown RBP eCLIP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 KCNAB1Q14722 419 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF750Q32MQ0 723 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 MGAT5BQ3V5L5 792 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 HYIQ5T013 277 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ANKRD45Q5TZF3 282 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 MRNIPQ6NTE8 343 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 KCTD20Q7Z5Y7 419 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 LRRTM4Q86VH4 590 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF280BQ86YH2 543 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 OR52N2Q8NGI0 321 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 RILPL2Q969X0 211 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 PHACTR3Q96KR7 559 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 PABPC3Q9H361 631 aaKnown RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 SEC61A2Q9H9S3 476 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 HECAQ9UBI9 543 aaPredicted RBP6.33□□□□□ -1.4
TUBD1-208ENST00000588009 SHOC2Q9UQ13 582 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 CDY1Q9Y6F8 540 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 SCINQ9Y6U3 715 aa6.33□□□□□ -1.4
TUBD1-208ENST00000588009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 HMX3A6NHT5 357 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 DBX1A6NMT0 343 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 TISP43B9A030 160 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 ACTL6BO94805 426 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 GCSHP23434 173 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 MPP1Q00013 466 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 EFR3AQ14156 821 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 METTL24Q5JXM2 366 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 HERC6Q8IVU3 1022 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 SLC44A2Q8IWA5 706 aaPredicted RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 NSUN7Q8NE18 718 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 MARS2Q96GW9 593 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 TMEM176AQ96HP8 235 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 LMF1Q96S06 567 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 SEC62Q99442 399 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 DDX23Q9BUQ8 820 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 TP63Q9H3D4 680 aaPredicted RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 WASH6PQ9NQA3 447 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 DNMT3BQ9UBC3 853 aaKnown RBP6.32□□□□□ -1.4
TUBD1-208ENST00000588009 CDYLQ9Y232 598 aa6.32□□□□□ -1.4
TUBD1-208ENST00000588009 DNPH1O43598 174 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 MFAP3LO75121 409 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 PIAS2O75928 621 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 NTSR2O95665 410 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 CHRM3P20309 590 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 MST1P26927 711 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 LRPAP1P30533 357 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SLURP1P55000 103 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 LILRA4P59901 499 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 AP2B1P63010 937 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SATB1Q01826 763 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 KRT17Q04695 432 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF844Q08AG5 666 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 GRM7Q14831 915 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 VMACQ2NL98 169 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 MANEALQ5VSG8 457 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 CACHD1Q5VU97 1274 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 TAPT1Q6NXT6 567 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 TAF2Q6P1X5 1199 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SLC30A10Q6XR72 485 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 ELOA2Q8IYF1 753 aaPredicted RBP6.31□□□□□ -1.4
TUBD1-208ENST00000588009 ESX1Q8N693 406 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 PSD4Q8NDX1 1056 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 SCAMP5Q8TAC9 235 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 BPIFB1Q8TDL5 484 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 LRIG1Q96JA1 1093 aa6.31□□□□□ -1.4
TUBD1-208ENST00000588009 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms