RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SCAF11Q99590 1463 aaKnown RBP5.42□□□□□ -1.54
VMP1-205ENST00000587470 ABCC3O15438 1527 aa5.42□□□□□ -1.54
VMP1-205ENST00000587470 EIF2AK4Q9P2K8 1649 aaKnown RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 BLMP54132 1417 aaPredicted RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 ARHGAP31Q2M1Z3 1444 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 SLC16A6O15403 523 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 RBMXL2O75526 392 aaKnown RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 ZRANB2O95218 330 aaKnown RBP eCLIP5.41□□□□□ -1.54
VMP1-205ENST00000587470 GJB1P08034 283 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 PPP3CBP16298 524 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 PDCP20941 246 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 LPOP22079 712 aaPredicted RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 LMO1P25800 156 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 RECQLP46063 649 aaPredicted RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 NPTX2P47972 431 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 SOX10P56693 466 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 HABP2Q14520 560 aaPredicted RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 DEFB132Q7Z7B7 95 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 LRRC59Q96AG4 307 aaKnown RBP5.41□□□□□ -1.54
VMP1-205ENST00000587470 ASPSCR1Q9BZE9 553 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 SIK2Q9H0K1 926 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 GPR35Q9HC97 309 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 PCDH12Q9NPG4 1184 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 KLC4Q9NSK0 619 aa5.41□□□□□ -1.54
VMP1-205ENST00000587470 PRDM15P57071 1507 aaPredicted RBP5.4□□□□□ -1.54
VMP1-205ENST00000587470 LMTK2Q8IWU2 1503 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 WDR27A2RRH5 827 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 PRSS29PA6NIE9 313 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 ZNF785A8K8V0 405 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 ADM5C9JUS6 153 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 F5H697 171 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 TRIAP1O43715 76 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 SOAT2O75908 522 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
VMP1-205ENST00000587470 CHRM2P08172 466 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 CDK4P11802 303 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 GPD1P21695 349 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 PRDX5P30044 214 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 PIK3CGP48736 1102 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 PSMC1P62191 440 aaKnown RBP5.4□□□□□ -1.54
VMP1-205ENST00000587470 TXNRD1Q16881 649 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 OSBPL9Q96SU4 736 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 WDCPQ9H6R7 721 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 CPNE5Q9HCH3 593 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 FRMD4BQ9Y2L6 1034 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 PCDHA3Q9Y5H8 950 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 COL4A3BPQ9Y5P4 624 aa5.4□□□□□ -1.54
VMP1-205ENST00000587470 NUP155O75694 1391 aa5.4□□□□□ -1.55
VMP1-205ENST00000587470 AHDC1Q5TGY3 1603 aaPredicted RBP5.39□□□□□ -1.55
VMP1-205ENST00000587470 A0A0B4J269 797 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 LRRC14BA6NHZ5 514 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 DTNBO60941 627 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 ELFN1P0C7U0 828 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 ATF3P18847 181 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 TUBB3Q13509 450 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 KIF22Q14807 665 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 TSTD2Q5T7W7 516 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 FAM90A1Q86YD7 464 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 PRR18Q8N4B5 295 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 SARAFQ96BY9 339 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 SMAD5Q99717 465 aaKnown RBP5.39□□□□□ -1.55
VMP1-205ENST00000587470 ETAA1Q9NY74 926 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 ZDHHC8Q9ULC8 765 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 KANK1Q14678 1352 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 NOS1P29475 1434 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 SETD5Q9C0A6 1442 aa5.39□□□□□ -1.55
VMP1-205ENST00000587470 EP400Q96L91 3159 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 RARBP10826 455 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 NDUFV1P49821 464 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 ZNF135P52742 658 aaPredicted RBP5.38□□□□□ -1.55
VMP1-205ENST00000587470 HK3P52790 923 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 TCF15Q12870 199 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 NOGQ13253 232 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 IDI1Q13907 227 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 ZNF788Q6ZQV5 615 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 USP45Q70EL2 814 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
VMP1-205ENST00000587470 ALG8Q9BVK2 526 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 TPSD1Q9BZJ3 242 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 AMBRA1Q9C0C7 1298 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 NR2E3Q9Y5X4 410 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 ADGRA2Q96PE1 1338 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 CFAP65Q6ZU64 1925 aaKnown RBP5.38□□□□□ -1.55
VMP1-205ENST00000587470 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 NKTRP30414 1462 aaKnown RBP5.38□□□□□ -1.55
VMP1-205ENST00000587470 ERVK-7P63135 1459 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 SLIT1O75093 1534 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 UNC13BO14795 1591 aa5.38□□□□□ -1.55
VMP1-205ENST00000587470 LINC00473A8K010 186 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 GCOM1H8Y6P7 765 aaPredicted RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 POU2F2P09086 479 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 PHKA1P46020 1223 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 FOXF2Q12947 444 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 TMEM240Q5SV17 173 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 TAF2Q6P1X5 1199 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms