RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 FGF19O95750 216 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 STAU1O95793 577 aaKnown RBP17.23■□□□□ 0.35
CXXC1-209ENST00000587342 C4BPAP04003 597 aaKnown RBP17.23■□□□□ 0.35
CXXC1-209ENST00000587342 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 CDC25CP30307 473 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 NBL1P41271 181 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 WDR72Q3MJ13 1102 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 ZCWPW2Q504Y3 356 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 FRMD5Q7Z6J6 570 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 SPATA2LQ8IUW3 424 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-209ENST00000587342 SMYD4Q8IYR2 804 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-209ENST00000587342 ZFYVE19Q96K21 471 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 SDCBP2Q9H190 292 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 CDH9Q9ULB4 789 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 MAGED2Q9UNF1 606 aaPredicted RBP17.23■□□□□ 0.35
CXXC1-209ENST00000587342 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 CCL26Q9Y258 94 aa17.23■□□□□ 0.35
CXXC1-209ENST00000587342 FAM170BA6NMN3 283 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 SLC38A8A6NNN8 435 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 TACC1O75410 805 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 RAP1GAPP47736 663 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 SOX9P48436 509 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 CACNA2D1P54289 1103 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 PNOCQ13519 176 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 KCNB1Q14721 858 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 IRF7Q92985 503 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 PCED1BQ96HM7 432 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 FUBP3Q96I24 572 aaKnown RBP eCLIP17.22■□□□□ 0.35
CXXC1-209ENST00000587342 TRPV5Q9NQA5 729 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 NXF1Q9UBU9 619 aaKnown RBP17.22■□□□□ 0.35
CXXC1-209ENST00000587342 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
CXXC1-209ENST00000587342 PIAS3Q9Y6X2 628 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 CACNA1IQ9P0X4 2223 aa17.22■□□□□ 0.35
CXXC1-209ENST00000587342 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 PROB1E7EW31 1015 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 ZNF263O14978 683 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 AKAP3O75969 853 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CSH1P0DML2 217 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CSH2P0DML3 217 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 BDNFP23560 247 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 WEE1P30291 646 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 MAGEA11P43364 429 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CDH8P55286 799 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 USP46P62068 366 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
CXXC1-209ENST00000587342 BIRC3Q13489 604 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 TRPC3Q13507 836 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 NCOA4Q13772 614 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 TAF12Q16514 161 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 ARHGAP15Q53QZ3 475 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CEP135Q66GS9 1140 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CMTM8Q8IZV2 173 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 GUF1Q8N442 669 aaKnown RBP17.21■□□□□ 0.35
CXXC1-209ENST00000587342 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
CXXC1-209ENST00000587342 USP13Q92995 863 aaPredicted RBP17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CLDN23Q96B33 292 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.35
CXXC1-209ENST00000587342 MYRFLQ96LU7 910 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 IRF2BPLQ9H1B7 796 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 VRTNQ9H8Y1 702 aa17.21■□□□□ 0.35
CXXC1-209ENST00000587342 CHADO15335 359 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 PHACTR2O75167 634 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 TRIM49P0CI25 452 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 TRIM49CP0CI26 452 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 NR2F2P24468 414 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ATICP31939 592 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
CXXC1-209ENST00000587342 TNNC1P63316 161 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 NUCB2P80303 420 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ZACNQ401N2 412 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ZNF852Q6ZMS4 543 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ASCL5Q7RTU5 278 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 C1orf210Q8IVY1 113 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 MAB21L3Q8N8X9 362 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 OR6B3Q8NGW1 331 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 OSBPL6Q9BZF3 934 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 HMGXB4Q9UGU5 601 aa17.2■□□□□ 0.34
CXXC1-209ENST00000587342 NDRG2Q9UN36 371 aaKnown RBP17.2■□□□□ 0.34
CXXC1-209ENST00000587342 CYP27A1Q02318 531 aa17.19■□□□□ 0.34
CXXC1-209ENST00000587342 TNK2Q07912 1038 aa17.19■□□□□ 0.34
CXXC1-209ENST00000587342 NFIL3Q16649 462 aa17.19■□□□□ 0.34
CXXC1-209ENST00000587342 SPOPLQ6IQ16 392 aa17.19■□□□□ 0.34
CXXC1-209ENST00000587342 TXNDC11Q6PKC3 985 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms