RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ZNF606Q8WXB4 792 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 DDX1Q92499 740 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 LPIN3Q9BQK8 851 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 FAM49BQ9NUQ9 324 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 AFF4Q9UHB7 1163 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 BZW2Q9Y6E2 419 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 MTMR11A4FU01 709 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 THAP12O43422 761 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 ATP8B3O60423 1300 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 CCDC130P13994 396 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 GOLGA8FQ08AF8 430 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 GOLGA8DPQ0D2H9 430 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 TSR1Q2NL82 804 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 HABP4Q5JVS0 413 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PPP1R26Q5T8A7 1209 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 LCLAT1Q6UWP7 414 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PAQR9Q6ZVX9 377 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 NOP9Q86U38 636 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 SLC2A14Q8TDB8 520 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PANX2Q96RD6 677 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 SYT11Q9BT88 431 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 B3GNT5Q9BYG0 378 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PRDM12Q9H4Q4 367 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 HSFX1Q9UBD0 423 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PCDHGC3Q9UN70 934 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 PCDHB5Q9Y5E4 795 aa18.01■□□□□ 0.47
PRKCSH-203ENST00000586486 CSPG5O95196 566 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 VNN2O95498 520 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 CALCAP01258 141 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 SERPING1P05155 500 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 ATF2P15336 505 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 POU3F3P20264 500 aaPredicted RBP18■□□□□ 0.47
PRKCSH-203ENST00000586486 FECHP22830 423 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 ARPP19P56211 112 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 CDK17Q00537 523 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 CDR2Q01850 454 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 CYP27A1Q02318 531 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 KLHL30Q0D2K2 578 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 GRIN2CQ14957 1233 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 LILRA6Q6PI73 481 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 WDR59Q6PJI9 974 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 RNF19BQ6ZMZ0 732 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 FAM35AQ86V20 835 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 SPATA2LQ8IUW3 424 aaPredicted RBP18■□□□□ 0.47
PRKCSH-203ENST00000586486 GLYCTKQ8IVS8 523 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 ZNHIT6Q9NWK9 470 aaKnown RBP18■□□□□ 0.47
PRKCSH-203ENST00000586486 TSPAN16Q9UKR8 245 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 PATJQ8NI35 1801 aa18■□□□□ 0.47
PRKCSH-203ENST00000586486 MTCL1Q9Y4B5 1905 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 KLRC2P26717 231 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 MAGEA11P43364 429 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 CLCN4P51793 760 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 GPIHBP1Q8IV16 184 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 PPP2R3CQ969Q6 453 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 SMARCD1Q96GM5 515 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 PGLYRP2Q96PD5 576 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 ZNF518BQ9C0D4 1074 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 MYO9BQ13459 2157 aa17.99■□□□□ 0.47
PRKCSH-203ENST00000586486 TGM5O43548 720 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 CLASP2O75122 1294 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 GLUD1P00367 558 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 DUSP6Q16828 381 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 GOLGA7BQ2TAP0 167 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 VSTM1Q6UX27 236 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ADGRD2Q7Z7M1 963 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ANKRD52Q8NB46 1076 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 SLC20A1Q8WUM9 679 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 NSUN3Q9H649 340 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 KRT82Q9NSB4 513 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ABI2Q9NYB9 513 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ARHGAP20Q9P2F6 1191 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 HESX1Q9UBX0 185 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 FBXW11Q9UKB1 542 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 CLDN5O00501 218 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 MICAL2O94851 1124 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 FAM200BP0CF97 657 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 CHRNB2P17787 502 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ANXA13P27216 316 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ADORA2BP29275 332 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 BCAT1P54687 386 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 FMO1Q01740 532 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ADCY1Q08828 1119 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 TTC30AQ86WT1 665 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 TCEAL8Q8IYN2 117 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 ATAD1Q8NBU5 361 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 OLIG1Q8TAK6 271 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 AGPAT1Q99943 283 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 MED10Q9BTT4 135 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 LHX5Q9H2C1 402 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 CSNK1G1Q9HCP0 422 aa17.98■□□□□ 0.47
PRKCSH-203ENST00000586486 MMEP08473 750 aa17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 HAPLN1P10915 354 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-203ENST00000586486 SKILP12757 684 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms