RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 OBP2AQ9NY56 170 aa13.24□□□□□ -0.29
ERCC2-207ENST00000586441 SNX9Q9Y5X1 595 aa13.24□□□□□ -0.29
ERCC2-207ENST00000586441 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
ERCC2-207ENST00000586441 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 DLATP10515 647 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 MYL4P12829 197 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 GLULP15104 373 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 WARSP23381 471 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 FCARP24071 287 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 CDC25CP30307 473 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 MAGEA11P43364 429 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 RPL10AP62906 217 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 NHLH1Q02575 133 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 MGAT5BQ3V5L5 792 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 FAM78AQ5JUQ0 283 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 CWF19L1Q69YN2 538 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 LRRC8AQ8IWT6 810 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 ADGRF2Q8IZF7 708 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 GUF1Q8N442 669 aaKnown RBP13.23□□□□□ -0.29
ERCC2-207ENST00000586441 TMEM105Q8N8V8 129 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 HSD3B7Q9H2F3 369 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 ARHGEF3Q9NR81 526 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 RWDD2AQ9UIY3 292 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
ERCC2-207ENST00000586441 PPP1R3GB7ZBB8 358 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
ERCC2-207ENST00000586441 CSH1P0DML2 217 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 CSH2P0DML3 217 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 ZNF18P17022 549 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 PSMC3P17980 439 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 ATF6P18850 670 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
ERCC2-207ENST00000586441 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
ERCC2-207ENST00000586441 MAGEA9P43362 315 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 TCF15Q12870 199 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 COBLL1Q53SF7 1204 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 C1orf228Q6PIY5 440 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 POTEHQ6S545 545 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 GAREM2Q75VX8 874 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 TMC6Q7Z403 805 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 PRSS33Q8NF86 280 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 SHKBP1Q8TBC3 707 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 IRF7Q92985 503 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 CCDC127Q96BQ5 260 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 TRMT61BQ9BVS5 477 aaKnown RBP13.22□□□□□ -0.29
ERCC2-207ENST00000586441 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
ERCC2-207ENST00000586441 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 SIT1Q9Y3P8 196 aa13.22□□□□□ -0.29
ERCC2-207ENST00000586441 F5P12259 2224 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 DENND4CQ5VZ89 1909 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 C4BPAP04003 597 aaKnown RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 NR3C1P04150 777 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 ATP1A3P13637 1013 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 DDX6P26196 483 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 PAK1Q13153 545 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TRPC3Q13507 836 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TAF12Q16514 161 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 WDR72Q3MJ13 1102 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 VSTM1Q6UX27 236 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 KBTBD7Q8WVZ9 684 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TAF4BQ92750 862 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 MSANTD3Q96H12 275 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 ZSWIM3Q96MP5 696 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TBC1D17Q9HA65 648 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 IL21Q9HBE4 155 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 ABI2Q9NYB9 513 aaPredicted RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.29
ERCC2-207ENST00000586441 MRPS17Q9Y2R5 130 aaKnown RBP13.21□□□□□ -0.29
ERCC2-207ENST00000586441 KANSL1LA0AUZ9 987 aa13.2□□□□□ -0.3
ERCC2-207ENST00000586441 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms