RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 BFSP2Q13515 415 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CUL2Q13617 745 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 DSC3Q14574 896 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ZNF699Q32M78 642 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 DENND2CQ68D51 928 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 LRRC8DQ7L1W4 858 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 PALB2Q86YC2 1186 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CNPY4Q8N129 248 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CYFIP2Q96F07 1278 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 XYLT2Q9H1B5 865 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ATP8A1Q9Y2Q0 1164 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 NR2E1Q9Y466 385 aa15.85■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SMIM28A0A1B0GU29 152 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 MEIS3P2A8K0S8 358 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CYP26A1O43174 497 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 RARGP13631 454 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SELPP16109 830 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CHRNB2P17787 502 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 POLR2BP30876 1174 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 GJA8P48165 433 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CDR2Q01850 454 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ZBTB6Q15916 424 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SYDE1Q6ZW31 735 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 PRELID2Q8N945 189 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 OR2W6PQ8NHA6 318 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SLC20A1Q8WUM9 679 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 MAGOHBQ96A72 148 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ADAM2Q99965 735 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 TRIM51Q9BSJ1 452 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ROPN1BQ9BZX4 212 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 LRRC19Q9H756 370 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ROPN1Q9HAT0 212 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ITGA11Q9UKX5 1188 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 AGTP01019 485 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 KRT5P13647 590 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 IBSPP21815 317 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 COMTP21964 271 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 TBXAS1P24557 533 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 LIG3P49916 1009 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SEC24CP53992 1094 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 RWDD2BP57060 319 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 MAGOHP61326 146 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 PTPROQ16827 1216 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 SMYD5Q6GMV2 418 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 CCDC137Q6PK04 289 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 ZNF677Q86XU0 584 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 HACE1Q8IYU2 909 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 LPPQ93052 612 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 PPANQ9NQ55 473 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 BCCIPQ9P287 314 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
CDK5RAP3-236ENST00000584991 KCNE1P15382 129 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MMP13P45452 471 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RBP5P82980 135 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ERMARDQ5T6L9 678 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ICE2Q659A1 982 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PPP1R2P3Q6NXS1 205 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SLC13A5Q86YT5 568 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 BEST2Q8NFU1 509 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TRIM11Q96F44 468 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 NIF3L1Q9GZT8 377 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GRHL1Q9NZI5 618 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 NXF1Q9UBU9 619 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 POLIQ9UNA4 740 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SCN1AP35498 2009 aa15.83■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ANKRD65E5RJM6 399 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MYBL1P10243 752 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 COL6A1P12109 1028 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CYP11B1P15538 503 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 COILP38432 576 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SLC1A1P43005 524 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RAB27AP51159 221 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PDE6CP51160 858 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PLTPP55058 493 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 WDR72Q3MJ13 1102 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TRIM60Q495X7 471 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZNF667Q5HYK9 610 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GKAP1Q5VSY0 366 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ACAD10Q6JQN1 1059 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TRMT10CQ7L0Y3 403 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ANKRD33Q7Z3H0 272 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 NOP9Q86U38 636 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SLC47A2Q86VL8 602 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZNF564Q8TBZ8 553 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RAPGEF5Q92565 580 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ART4Q93070 314 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZFP42Q96MM3 310 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TRAIPQ9BWF2 469 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 EPB41L4BQ9H329 900 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CCDC134Q9H6E4 229 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ACP6Q9NPH0 428 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 AVENQ9NQS1 362 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 HOMER3Q9NSC5 361 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms