RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 STRN3Q13033 797 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ALCAMQ13740 583 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ZBTB6Q15916 424 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 DCAF4L1Q3SXM0 396 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 SGO2Q562F6 1265 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 HABP4Q5JVS0 413 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 ZNF658Q5TYW1 1059 aaPredicted RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 SCARA3Q6AZY7 606 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ISM2Q6H9L7 571 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 FDX2Q6P4F2 183 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ADAMTSL4Q6UY14 1074 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 NELFCDQ8IXH7 590 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 C12orf56Q8IXR9 622 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ZC3H3Q8IXZ2 948 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 ADSSL1Q8N142 457 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 GUF1Q8N442 669 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 SMARCE1Q969G3 411 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 ZMAT2Q96NC0 199 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 CBWD1Q9BRT8 395 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 TMEM117Q9H0C3 514 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 MTIF3Q9H2K0 278 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 TMEM206Q9H813 350 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 LIN7BQ9HAP6 207 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 EXOC1Q9NV70 894 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 CPSF3Q9UKF6 684 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 PLAGL2Q9UPG8 496 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 TRAF3IP3Q9Y228 551 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 INSL6Q9Y581 213 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
CDH8-213ENST00000584966 UNC80Q8N2C7 3258 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 BRWD1Q9NSI6 2320 aa6.13□□□□□ -1.43
CDH8-213ENST00000584966 TTC26A0AVF1 554 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 EPOPA6NHQ4 379 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 TBKBP1A7MCY6 615 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 GOLGA6L22H0YM25 854 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 BIN1O00499 593 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PDXKO00764 312 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 HNRNPDLO14979 420 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 CLIC2O15247 247 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 OGTO15294 1046 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 RECQL4O94761 1208 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 SMC2O95347 1197 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 EFEMP2O95967 443 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 MBD3O95983 291 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 CA3P07451 260 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 STAG3L1P0CL83 205 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ITGA4P13612 1032 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ACPPP15309 386 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 KCNE1P15382 129 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ATF4P18848 351 aaPredicted RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 EPHA1P21709 976 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PTPRDP23468 1912 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ACOT2P49753 483 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 LIG4P49917 911 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 FXR1P51114 621 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH8-213ENST00000584966 SNRPFP62306 86 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 POU5F1Q01860 360 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 DSC1Q08554 894 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PWP1Q13610 501 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH8-213ENST00000584966 NFIL3Q16649 462 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ZNF568Q3ZCX4 644 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ANKRD40Q6AI12 368 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 SLFN12LQ6IEE8 588 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 CENPPQ6IPU0 288 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 CD300LGQ6UXG3 332 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ZNF280BQ86YH2 543 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 THNSL1Q8IYQ7 743 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 CMTR2Q8IYT2 770 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 AGBL5Q8NDL9 886 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PLEKHO2Q8TD55 490 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PGBD4Q96DM1 585 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 PPP1R10Q96QC0 940 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 GAD1Q99259 594 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ADPGKQ9BRR6 497 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 TRIM56Q9BRZ2 755 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 GBP3Q9H0R5 595 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 NUP62CLQ9H1M0 184 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 NKX2-4Q9H2Z4 354 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 TTYH1Q9H313 450 aaPredicted RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 PCIF1Q9H4Z3 704 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 NRDE2Q9H7Z3 1164 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 RSAD1Q9HA92 442 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 UBN1Q9NPG3 1134 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 TBC1D13Q9NVG8 400 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 RMND1Q9NWS8 449 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 ADAMTS1Q9UHI8 967 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 AGO2Q9UKV8 859 aaKnown RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 EXOC7Q9UPT5 735 aa6.12□□□□□ -1.43
CDH8-213ENST00000584966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
CDH8-213ENST00000584966 MYH10P35580 1976 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SMIM28A0A1B0GU29 152 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 GOLGA8IPA6NC78 632 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms