RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PTRH1Q86Y79 214 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.19□□□□□ -2.063e-6■■■□□ 15.1
SMCHD1-211ENST00000584897 ZNF610Q8N9Z0 462 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 POF1BQ8WVV4 589 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NUP88Q99567 741 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 C7orf25Q9BPX7 421 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 SENP7Q9BQF6 1050 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 TACO1Q9BSH4 297 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PLA2G12BQ9BX93 195 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ANKRD2Q9GZV1 360 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 KIAA1586Q9HCI6 787 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PTGFRNQ9P2B2 879 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NCDNQ9UBB6 729 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF2B4Q9UI10 523 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FZD1Q9UP38 647 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM205AQ6ZU69 1335 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC151A5D8V7 595 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 BBOX1O75936 387 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CNOT4O95628 575 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 EFEMP2O95967 443 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 AKAP5P24588 427 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 RPS12P25398 132 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ITGB8P26012 769 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MAN1A1P33908 653 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 HTR3AP46098 478 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 SRSF2Q01130 221 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ANO6Q4KMQ2 910 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC38Q502W7 563 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FSTL4Q6MZW2 842 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC174Q6PII3 467 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 LMBR1LQ6UX01 489 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 C15orf52Q6ZUT6 534 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 RFX8Q6ZV50 586 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 BMP8AQ7Z5Y6 402 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PHYKPLQ8IUZ5 450 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC103Q8IW40 242 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ADGRG2Q8IZP9 1017 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC89Q8N998 374 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ZBTB34Q8NCN2 500 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NUDT10Q8NFP7 164 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 AUTS2Q8WXX7 1259 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MUL1Q969V5 352 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NUDT11Q96G61 164 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 TIGD1Q96MW7 591 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CD244Q9BZW8 370 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 DENND2AQ9ULE3 1009 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 AFG3L2Q9Y4W6 797 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PAXBP1Q9Y5B6 917 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PPP2R3BQ9Y5P8 575 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CHL1O00533 1208 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 B3GALT2O43825 422 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 AOAHP28039 575 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 EPHX2P34913 555 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MSX2P35548 267 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MRE11P49959 708 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NAP1L1P55209 391 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MEF2AQ02078 507 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 TNFAIP2Q03169 654 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 LRRC32Q14392 662 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ICAM4Q14773 271 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 STILQ15468 1287 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM153CQ494X1 144 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 INO80DQ53TQ3 878 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 RNF220Q5VTB9 566 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 TMEM200BQ69YZ2 307 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ERC1Q8IUD2 1116 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ZGPATQ8N5A5 531 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC191Q8NCU4 936 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PPHLN1Q8NEY8 458 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ATXN2LQ8WWM7 1075 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ZCCHC14Q8WYQ9 949 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CAVIN3Q969G5 261 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 C1GALT1C1Q96EU7 318 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 RBM17Q96I25 401 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 WDR92Q96MX6 357 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 BRIP1Q9BX63 1249 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 GPR87Q9BY21 358 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NUP62CLQ9H1M0 184 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MYLK2Q9H1R3 596 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PTPRHQ9HD43 1115 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 DDX20Q9UHI6 824 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 DPP7Q9UHL4 492 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 HDAC9Q9UKV0 1011 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ABT1Q9ULW3 272 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NEU2Q9Y3R4 380 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MYO1CO00159 1063 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ZRANB2O95218 330 aaKnown RBP eCLIP2.19□□□□□ -2.062e-6■□□□□ 11.2
SMCHD1-211ENST00000584897 FTLP02792 175 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MMP10P09238 476 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 LCP1P13796 627 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 BRAFP15056 766 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 NPR1P16066 1061 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 DSG1Q02413 1049 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PPARAQ07869 468 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FOXD4Q12950 439 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ARHGEF6Q15052 776 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 TMEM63BQ5T3F8 832 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FAAH2Q6GMR7 532 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 SULT6B1Q6IMI4 303 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms