RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	CLTC	Q00610	1675 aa	Known RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	DENND4B	O75064	1496 aa	Predicted RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	NUP153	P49790	1475 aa	Known RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	TISP43	B9A030	160 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	MOSPD3	O75425	235 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	JTB	O76095	146 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	NHLRC4	P0CG21	123 aa	Predicted RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	MYBL2	P10244	700 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	RARB	P10826	455 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ITGAL	P20701	1170 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	PRDX5	P30044	214 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	CD6	P30203	668 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	HSPA1L	P34931	641 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	PIK3CG	P48736	1102 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ADK	P55263	362 aa	Known RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ETFDH	Q16134	617 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ABCB5	Q2M3G0	1257 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ZNF618	Q5T7W0	954 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	TEDDM1	Q5T9Z0	273 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	VPS53	Q5VIR6	699 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	ANKRD16	Q6P6B7	361 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	FCRL4	Q96PJ5	515 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	TINAGL1	Q9GZM7	467 aa	Predicted RBP	3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	SIK2	Q9H0K1	926 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	SERHL	Q9NQF3	203 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	TRHDE	Q9UKU6	1024 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	MRFAP1	Q9Y605	127 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	CACNA1I	Q9P0X4	2223 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	PTPRT	O14522	1441 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	FHOD3	Q2V2M9	1422 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	AKNA	Q7Z591	1439 aa		3.76	□□□□□ -1.81
VAPA-208	ENST00000584796	CDC42BPB	Q9Y5S2	1711 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	CDK13	Q14004	1512 aa	Known RBP	3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	IQSEC2	Q5JU85	1478 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	RAPGEF2	Q9Y4G8	1499 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796		H0YIZ8	118 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	MYO1F	O00160	1098 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	IKBKB	O14920	756 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	KIF20A	O95235	890 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	IGKV2-30	P06310	120 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	NDUFB7	P17568	137 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	PCBP2	Q15366	365 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	UAP1L1	Q3KQV9	507 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	AARS2	Q5JTZ9	985 aa	Known RBP	3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	SLC29A4	Q7RTT9	530 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	ZNF804A	Q7Z570	1209 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	YTHDF3	Q7Z739	585 aa	Known RBP	3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	ZBTB9	Q96C00	473 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	BHMT2	Q9H2M3	363 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	NRIP3	Q9NQ35	241 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	SH3BP4	Q9P0V3	963 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	RGS17	Q9UGC6	210 aa	Predicted RBP	3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	ATP8A1	Q9Y2Q0	1164 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	RAD54B	Q9Y620	910 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	KIDINS220	Q9ULH0	1771 aa		3.75	□□□□□ -1.81
VAPA-208	ENST00000584796	SHTN1	A0MZ66	631 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	LRRC14B	A6NHZ5	514 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	PPP6C	O00743	305 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	GABRD	O14764	452 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	ADAMTS3	O15072	1205 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	PPM1D	O15297	605 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	VPS4B	O75351	444 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	ARIH2	O95376	493 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	BMP15	O95972	392 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	FAM163B	P0C2L3	166 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	CHRM3	P20309	590 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	SMARCA1	P28370	1054 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	MPG	P29372	298 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	GCLC	P48506	637 aa	Predicted RBP	3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	MTMR1	Q13613	665 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	SUPT20HL1	Q3ZLR7	823 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	PRAMEF17	Q5VTA0	474 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	EGFLAM	Q63HQ2	1017 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	UHRF1BP1	Q6BDS2	1440 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	POGZ	Q7Z3K3	1410 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	WDR53	Q7Z5U6	358 aa	Predicted RBP	3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	DTX2	Q86UW9	622 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	C3orf20	Q8ND61	904 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	NELL2	Q99435	816 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	C1orf43	Q9BWL3	253 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	DLL3	Q9NYJ7	618 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	ZDHHC8	Q9ULC8	765 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	SH2B3	Q9UQQ2	575 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	POLH	Q9Y253	713 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	MROH2A	A6NES4	1674 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	ITSN2	Q9NZM3	1697 aa		3.74	□□□□□ -1.81
VAPA-208	ENST00000584796	ZNF521	Q96K83	1311 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	KDM5C	P41229	1560 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	VWDE	Q8N2E2	1590 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	TOP3B	O95985	862 aa	Known RBP	3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	TUBB4A	P04350	444 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	PDHA1	P08559	390 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	SFPQ	P23246	707 aa	Known RBP eCLIP	3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	ALDH9A1	P49189	494 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	BOP1	Q14137	746 aa	Known RBP	3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	CEP78	Q5JTW2	689 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	EFCAB2	Q5VUJ9	269 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	SLC9A4	Q6AI14	798 aa		3.73	□□□□□ -1.81
VAPA-208	ENST00000584796	SLC18B1	Q6NT16	456 aa		3.73	□□□□□ -1.81

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