RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 APBB3O95704 486 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 F11P03951 625 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 HAPLN1P10915 354 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 SCP2P22307 547 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 CDC25AP30304 524 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 PRPHP41219 470 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 LIG4P49917 911 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 TOB1P50616 345 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 GALK1P51570 392 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 NEK4P51957 841 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 NCKAP1LP55160 1127 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 NLRP12P59046 1061 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 ZNF252P-AS1Q0IIN9 211 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 BFSP1Q12934 665 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 ZNF268Q14587 947 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 PDGFRLQ15198 375 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 HYIQ5T013 277 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 C9orf57Q5W0N0 161 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 CC2D1AQ6P1N0 951 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 DTHD1Q6ZMT9 781 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 TMEM150AQ86TG1 271 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 THEM5Q8N1Q8 247 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 MAB21L3Q8N8X9 362 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 SPPL2BQ8TCT7 592 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 ACDQ96AP0 544 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 P2RY13Q9BPV8 354 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 FBRSL1Q9HCM7 1045 aaKnown RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 POLR3BQ9NW08 1133 aaPredicted RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 LARSQ9P2J5 1176 aaKnown RBP9.44□□□□□ -0.9
NUP85-223ENST00000583877 DERAQ9Y315 318 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 PTPRBP23467 1997 aa9.44□□□□□ -0.9
NUP85-223ENST00000583877 HNRNPDLO14979 420 aaKnown RBP9.43□□□□□ -0.9
NUP85-223ENST00000583877 DCLK1O15075 740 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 SNPHO15079 494 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 PIGRP01833 764 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 CEACAM1P13688 526 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 ARSAP15289 507 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 HMGA1P17096 107 aaKnown RBP9.43□□□□□ -0.9
NUP85-223ENST00000583877 U2AF2P26368 475 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP85-223ENST00000583877 GJA4P35212 333 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 FOXC1Q12948 553 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
NUP85-223ENST00000583877 DMC1Q14565 340 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 TMEM132DQ14C87 1099 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 ZRSR1Q15695 479 aaKnown RBP9.43□□□□□ -0.9
NUP85-223ENST00000583877 IL17AQ16552 155 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 C11orf74Q86VG3 221 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 MON1AQ86VX9 555 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 CPA6Q8N4T0 437 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 RPLP0P6Q8NHW5 317 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 CCDC26Q8TAB7 109 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 TMEM9BQ9NQ34 198 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 PCDHB6Q9Y5E3 794 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 PLXNB3Q9ULL4 1909 aa9.43□□□□□ -0.9
NUP85-223ENST00000583877 A0A0B4J269 797 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 RCCD1A6NED2 376 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 PPP1R3GB7ZBB8 358 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CYB561D2O14569 222 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 NFICP08651 508 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 PLA2G4BP0C869 781 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CSH1P0DML2 217 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CSH2P0DML3 217 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CSRP1P21291 193 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 NMT1P30419 496 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 GBP1P32455 592 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 TAF6P49848 677 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CDR1P51861 262 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 DGKEP52429 567 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 USP39Q53GS9 565 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 PMS2CLQ68D20 193 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 TXNDC8Q6A555 127 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CCDC83Q8IWF9 413 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 DCP1BQ8IZD4 617 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 RIN3Q8TB24 985 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 OSCP1Q8WVF1 389 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 MRPS31Q92665 395 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 CD101Q93033 1021 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 ATP2A3Q93084 1043 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 PYM1Q9BRP8 204 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 CCSER1Q9C0I3 900 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 ASB7Q9H672 318 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 ECT2Q9H8V3 914 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 CPSF3Q9UKF6 684 aaKnown RBP9.42□□□□□ -0.9
NUP85-223ENST00000583877 ODF2LQ9ULJ1 636 aa9.42□□□□□ -0.9
NUP85-223ENST00000583877 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms