RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 GPR17Q13304 367 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 RAB33AQ14088 237 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MAPRE1Q15691 268 aaKnown RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 NFE2Q16621 373 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC142Q17RM4 750 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 TOGARAM2Q6ZUX3 1019 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 SLC47A2Q86VL8 602 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 SPATA2LQ8IUW3 424 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ACRBPQ8NEB7 543 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 GAS2L1Q99501 681 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 IGFLR1Q9H665 355 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 FAM49BQ9NUQ9 324 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 TMLHEQ9NVH6 421 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ARHGAP20Q9P2F6 1191 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CNTN6Q9UQ52 1028 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 PAEPP09466 180 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 SPATA31D3P0C874 917 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 VDRP11473 427 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC130P13994 396 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ADORA2BP29275 332 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 GNA15P30679 374 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ELF1P32519 619 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 NRIP1P48552 1158 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ZNF132P52740 706 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 BPIFB4P59827 614 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ADCY1Q08828 1119 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 SGO2Q562F6 1265 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 GPR153Q6NV75 609 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 C4orf50Q6ZRC1 276 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 SPATA31D4Q6ZUB0 917 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ZNF461Q8TAF7 563 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MYLPFQ96A32 169 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CYFIP2Q96F07 1278 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 B3GNT5Q9BYG0 378 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 DEF6Q9H4E7 631 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ABI2Q9NYB9 513 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 LMCD1Q9NZU5 365 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 KIAA1257Q9ULG3 409 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TSC2P49815 1807 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 A0A0U1RQJ8 604 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 MTMR11A4FU01 709 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 CLDN5O00501 218 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 PRRG1O14668 218 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 THAP12O43422 761 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TGM5O43548 720 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 NRDCO43847 1150 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 GLUD1P00367 558 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 FERP16591 822 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 DUSP4Q13115 394 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 DUSP6Q16828 381 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TPGS2Q68CL5 300 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 LLGL2Q6P1M3 1020 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 CYP26C1Q6V0L0 522 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 ZNF571Q7Z3V5 609 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 IRF2BP2Q7Z5L9 587 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 PASD1Q8IV76 773 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 ATAD1Q8NBU5 361 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 SLC2A14Q8TDB8 520 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TFAP2BQ92481 460 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 NUCKS1Q9H1E3 243 aaKnown RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 NHEJ1Q9H9Q4 299 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 CYP4F11Q9HBI6 524 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 AFF4Q9UHB7 1163 aaKnown RBP11.62□□□□□ -0.55
TOP3A-216ENST00000583804 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 PCDHB5Q9Y5E4 795 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
TOP3A-216ENST00000583804 COL4A4P53420 1690 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 TMCO5BA8MYB1 307 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 ABLIM3O94929 683 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 SERPING1P05155 500 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 ATF2P15336 505 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms